Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02260 CTTTTATCCGGTTCAATAAGATGCGAACCGAAACGGGATCTTGAGGCAAGTAGTACATGCGAACCGAAAAGAAAGAAGGGCTTGTATTGTACCATTTCCAATTTTCGTCTGATCTCATCTCATTTGATTTCCATTTCCTGCATCTGCATAATTCTCTTCTCCTACGCCAAACACCTCTCTCTCATTTCCAAAACTCGCTCACCATGGACGTAGGAGTCGGCGACGATCATTCTCCCGAAGCCGCCATATCACGGTGGAAATTTGCGGTGTCACGGCAGTACCAGCACATGCTCGACAAAACGACGCCGCACGTCCTCCGCCGCTGGATCGGGTGCTTGGTGGTGGCCGCCGTCTACGTCCTCCGCGTTTACTTTGTCCAAGGCTTCTACATCGTCTCCTACGCCCTCGGCATTTACATCCTCAACCTCCTCATCGGTTTCCTCTCCCCTCAGGTCGATCCCGAGATTCACGACGGCCCCACCCTCCCCACCCGAGGATCCGACGAGTTCCGTCCCTTCGTTCGCCGCCTCCCTGAGTTCAAATTCTGGTTTCATTCAAGCAGATTATGGATATTGAAAATGCCCCTCCGCTGTTCATACCGCCTTCTATGGTACTCAATCACAAAGGCATTTTGCATTGCATTTGTTATGACTTTCTTTAGTGCATTTGACGTACCAGTATTCTGGCCAATACTCCTTTTCTACTGGGTGGTCCTATTCACACTTACCATGAGGAGACAGATATCGCACATGATCAAATACAAATATGTACCATTCTCATTTGGGAAACAGCGCTATAATGGAAAGAGAGCACCGACAGAAAGTACAGGCCCGACCATGGACTGATTTCAGTTTAGTTGAACTTTTATTAGCCTACATTTAAGTCACAACCCCACATGTGGCTTGATATCATCTACAGTATATTTTAACAGCTGGAGCAATCTGAGGATTTGGTGGACGGAAAAGATTGCTTTGGGGTCTAGCATGGACGTATGACATCTGGATGTTCAATTCCCAATTGAGCAACTGTTTGGACATCTTCAATGTTTCTACGCCCTGGTAGAAGCTTTAGCATTGGGGAGATGTTGGGGGATCTCTCTTTACATCCCCCTTTTAGTAAAATCCTTTTTATTTTCTTTTTCTACGTAGGTGGGCAAATGCCAAACTCTTAGTGCTGAATTCATAGTTAAATAACGAGAATTTTAAGAAGTATGCGCCGAAGGAATCCCCTTCATTATTTGCAATGGGGTATTAACAATTCACCTTTTACATTGTATTTTTTTCCCCATTAATCATGTGATTTTCAGGAACTCATTCTTTCCCCTATAAATTTGCCCATACAATACTATTTCTTGGCATTGTTGTGATGCTTGCATTTGGAATGTCTGGACCTATTTATTTATTTATACATTTTGTGGATGAGGTTTGTCCTCACTTTTGGGCTGTATAACTGATATTCCCTCGAGATATTAAAGTTGCTCTTCTTCTTCACAAGGGTTTCTCAACAGAATGTCTTCAACATCCAGTGTTGTTTTTTTTATAAAAACCTAAGAAAATTGTCTTAAGAATTGATAACAAAGTATTTTTATGATACTTTTTTATCGGCGTTTCATCTACTCAAATTACTTTTGGATCATCTAGCTATAAGGCTGACCTTGTCTAGTTGTGATAAAACTTCTGTTTTTTTTTTTTTACTTTGGTTCAAAATGTAGTTGAACAATGAC 1723 0.4208 MRTEKKEGLVLYHFQFSSDLISFDFHFLHLHNSLLLRQTPLSHFQNSLTMDVGVGDDHSPEAAISRWKFAVSRQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYFVQGFYIVSYALGIYILNLLIGFLSPQVDPEIHDGPTLPTRGSDEFRPFVRRLPEFKFWFHSSRLWILKMPLRCSYRLLWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYNGKRAPTESTGPTMD 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02260 262 Pfam Rer1 family 69 173 IPR004932 GO:0016020
Pste1g02260 262 Pfam Rer1 family 184 248 IPR004932 GO:0016020
Pste1g02260 262 PANTHER PROTEIN RER1 56 251 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02260 Pste-Chr1 7647595 7650178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02260 50 262 Miscellaneous Gene Families AT4G39220 61.574 5.70e-90 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02260 1 7647595 7650178 Pste1g02260 1 7647595 7650178 ECH
Pste1g02260 1 7647595 7650178 Pste7g01067 7 9795873 9798822 PCT