Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02229 TGATTTCCTTGGTATAGAAGTGTTTGGTTGGTGGAAACAGTGGTGATGGCGAGTCGTTTATTCTCAAATAAATGGAACATCCGAGATTTGACTTCGGTATTGGTATTACTAAGAAGTAGCAAAGCCGCTTCAACTTCATTTCCGTATGTTGAACGTGATTCCTTGAAAACGGCGTCGTGTTTCAGGCAATACCACGACGGAAGGCCCAGAGGGCCCCTTTGGAGGGGAAAAAAGCTCATTGGCAAAGAAGCGCTTTTTGTGCTATCGGGGTTAAAGAGGTTTAAGGATGATGACGATAAGCTTCACAAGTTCATCAAAACTCACGTTCTCAGACTCTTGAAGATGGATATGATCGCTGTTCTCACTGAACTCGAGCGCCAAGAACAAGTTTCTCTCGCTCTCATGATGTTTAAGGTAATGCAAAAGCAAGATTGGTATAAGCCTGATGCATACCTCTATAAGGACTTGATCATTGCATTAGCTAGGTGTAAAAAAATGGAACAAGTATCGCAATTATGGGAAAGCATGAGAAAGGAGAATCTGTTCCCTGATTCTCAGACTTACACTGAAGTCATAAGGGGCTTCTTGAACTATGGATCTCCTGCAGATGCAATGAATATATATGAGGATATGAAGAATTCTCCGGATCCACCAGAGGAGTTGCCATTCAGGATTTTGTTGAAAGGACTCCTGCCACATCCGCTTTTGAGAAACAAAGTGAAACAAGATTTTGAGGAGATTTTTCCCGATTCAAGTATCTATGATCCTCCACAAGAGATATTTGGGGCTCGCTGAGGTTTGAACCCTTTATTCTATTACCCTGACTTCCAAACTCTGCTTTTAAATCAATGGTGGTTCCTTTAATCTATGACCCTAGTTATGTACAAAATACAATGTTAATGAGTTTGATTTGAAAGAATTGCAAATTCTTAAATATACATGATATGCATGTGGGCTGTGGTCAATAGGTTCTATGCTGCTGCAATGGGATAGTCAATTTTTTCCATTAAATAAATGGTGAGAATATAGTAAAATTTGATAGCACTAGCCTGGCTTATTGAACAAAAATTGTACGGAGAAAGTTGTCAATGAACAATAATAGGAATAGGATTTTTAATTTATCATCATGTAATTAGAAAATAGAAATATGACGATGC 1157 0.3881 MASRLFSNKWNIRDLTSVLVLLRSSKAASTSFPYVERDSLKTASCFRQYHDGRPRGPLWRGKKLIGKEALFVLSGLKRFKDDDDKLHKFIKTHVLRLLKMDMIAVLTELERQEQVSLALMMFKVMQKQDWYKPDAYLYKDLIIALARCKKMEQVSQLWESMRKENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNKVKQDFEEIFPDSSIYDPPQEIFGAR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02229 249 PANTHER PROTEIN THYLAKOID ASSEMBLY 8-LIKE, CHLOROPLASTIC 20 248 IPR044795 -
Pste1g02229 249 NCBIfam pentatricopeptide repeat 138 169 IPR002885 -
Pste1g02229 249 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 134 168 IPR002885 -
Pste1g02229 249 Pfam PPR repeat family 133 180 IPR002885 -
Pste1g02229 249 Gene3D Tetratricopeptide repeat domain 63 249 IPR011990 GO:0005515
Pste1g02229 249 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 169 203 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02229 Pste-Chr1 7477702 7479017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02229 104 215 Miscellaneous Gene Families AT4G11690 23.214 2.03e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02229 1 7477702 7479017 Pste1g02229 1 7477702 7479017 ECH