Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02158 ATTAGACATAGCGAGAGAGAAAGATGATAAAGCCTCAACGATATCATTCACAAAATCTGAACCGAAGCCTCTTGTTTCCGCAGCGGCCATCCGTTAACAGTAGTGCATTTCTGCCAGTATGGCTGAGGAGGCAAGAAAAGGTTAAGCACCTGGTTCTGGTTTCTGGCAACGTTGAAAGTAATAGTACACCTAAAACAACAACAACAACAGTAACAGTAGGAGATAAGACAACAGAGACAAATGGAGTCAAGGTTAAGGGCATAGTTAAGGTGAAAGTAACCGTGGGTGGTTTCTTTTCGAGTCTGAGGTTAGACCGAGGAATCGACGATATAACGGATTTGCTTGGTAAATCTCTCCTCCTGGAGCTTGTTAGCTCTCACCTCCATCCTGAGAGGGGAGTAGAGAAGGAGACGGTGAAAGCATATGCACATAAAGAAGGAAATGGTGAGGAGTCGATGAAGTACGAAAGTGAATTTGAAGTTCCAAATGATTTTGGGGAGATCGGTGCTATTCTGGTTGAGAATGAACATCACAAAGAGATGTTCCTTGAAAGCATTCACCTGTATGGCCTCCCTCAGGGTCTTATTCATTTTGATTGTGCCTCTTGGGTTCACTCCAAGTTCGATAATCCTACCAAAAGGGTCTTCTTCTCCAATAAGTGTTACTTACCGCAAGAGACACCGAGTGGAATAAGAAGATTAAGAGCACAAGAGTTGAGTAATAAGCGAGGGAATGGAGAAGGAAAACGAGAGAGCTTCGAAAGAATATATGATTACGATATATACAATGACCTTGGAGATCCTGATAAAAGCCTTGAACTTGAGAGACCTCCTTTAGGAGGGAAAGAGCGACCTTATCCTAGACGATGTCGAACAGGTCGCCCACACAGTGAAGCAGATCCTTTGTCAGAAAAAAGAAGTCGAAAATTTTACGTTCCAAGGGACGAGTGCTTCTCAGAGGTGAAGCAGCTCACCTTCTCTACCAAGACCTTACACTCGGTGTTGCTCATATTGCTTCCATCTCTGGGCAAAATTATCAAAGAAAAGGACCTTGCATTTCCCTACTTCCACGACATTGATTCCCTCTTCAGTCATGGCCTTGACTTACCTCCTGAGCATGAAACCCACAAGGGACTCCTAGGAACAATCATGCCCAGACTTGTCAAATCCATTTCTGGCGACAGGTCACACGTGCTTCGCTTTGAAACCCCTGAGACTATGAGCAGGGACAGATTTTTCTGGTTTAGGGATGAGGAATTTGCCAGACAGACTGTTGCTGGTCTCAACCCATATAGCATACGATTGGTCACAGAATGGCCATTGAGGAGTAAACTTGACCCGGAAAAATATGGTCCACCAGAATCAGCAATCACCTCAGAAATTATCAATAAAGAGATTGGAGGCTTTATGACTGTAGAAAAGGCCATCCAAGAAAAGAAGCTATTCATGTTAGACAACCATGACTTACTTTTACCGTTCGTGAACAAAGTACGGAAACTGAAGGGAACAACACTGTATGGGTCACGAACCTTGTTCTTTCTAAACCCAGAGGGGACACTGAGGCCTCTAGCCATTGAGCTGACTCGACCACCATCAAAATCAAATGGAAAAGGCCAATGGAAACAAGTTTTCACTCCTTCATGGCACTCAACCAGTGTTTGGCTCTGGAGGTTTGCCAAGGCTCATGTTCTTGCACATGACTCTGGCTATCACCAACTTGTTAGTCATTGGTTAAGAACCCACTGTGTGACAGAGCCGTATGTTATTGCAACCAACAGACAACTTAGTGAGATGCACCCCATAAACAGATTGCTACACCCTCATTTCCGTTACACAATGGAGATTAACGCTCTGGCACGGGAAGCACTTATTAACGCTGAAGGCACAATTGAGAGCTCATTTTCACCAGGGAAGTACTCCCTAGAGCTTAGTTCCGCGGTTTATGCCCTCCAATGGCGCTTTGACATGCAGGCACTACCTGCGGATCTAATCAGAAGGGGAATGGCCGTGGAAGATCCATTTTCTCCACATGGCTTAAAGCTTACCATTGAAGACTATCCTTTTGCCAACGATGGCCTCCTTCTGTGGGACGCTATAAAGTTATGGGTCACTGACTATGTAAATCACTATTACCCTGAACCAAGTCTTGTGGAGTCAGATGAGGAGCTGCAGGCATGGTGGACAGAGATTAGAACAGCTGGTCATGCTGACAAAAAAGATGAACCATGGTGGCCAGTTCTCAGAACCCCAAAAGACCTCATTAGAATCCTCAGTACAATCATATGGGTAACTTCTGGTCACCATGCAGCTGTGAACTTTGGCCAATATGTTTATGGAGGATATTTCCCAAACAGGCCTACAATTACCAGGACTAAAATGCCCTCAGAGGACCCTACAGAAGAGGAGTGGAAAAAGTTCATTGCAAATCCTGAAAGAGCACTTCTCAAGTGCTTTCCTTCTCAACTTCAAGCAACTAGAGTCATGGCTGTTTTGGATATTCTTTCAACTCATTCTCCTGATGAGGAATACTTAGGGGAGAAGATGGAACCATCATGGGGTGAAGACCCCGTCATTAAGGCTGCCTTTGAAAAATTTAGAGAAAGACTCAAGAAACTAGAAACACTGATTGATGAGAGGAATGAAAATACAATGTTGAAGAACAGAAATGGAGCTGGCATTGTTCCATACGAGCTTTTGAAACCTTTCTCAAAGCCTGGTGTGACTGGAATGGGGGTCCCCTGTAGTATATCTATTTAAGTTAACAAACTCATTATCTGTTAAGTGTGATTCTAGACTGATATGGGTTTTCAATTAAAACATAAGATAGACATAGTCACATAAACTGGTGCCTCAACCAGAATTTCAATAAACACAAGCTAAATGTTTCTTGAGAAAGTTCTTGAACCAATGAGAATAGTTCTTCAAAGATCTTC 2932 0.4352 MIKPQRYHSQNLNRSLLFPQRPSVNSSAFLPVWLRRQEKVKHLVLVSGNVESNSTPKTTTTTVTVGDKTTETNGVKVKGIVKVKVTVGGFFSSLRLDRGIDDITDLLGKSLLLELVSSHLHPERGVEKETVKAYAHKEGNGEESMKYESEFEVPNDFGEIGAILVENEHHKEMFLESIHLYGLPQGLIHFDCASWVHSKFDNPTKRVFFSNKCYLPQETPSGIRRLRAQELSNKRGNGEGKRESFERIYDYDIYNDLGDPDKSLELERPPLGGKERPYPRRCRTGRPHSEADPLSEKRSRKFYVPRDECFSEVKQLTFSTKTLHSVLLILLPSLGKIIKEKDLAFPYFHDIDSLFSHGLDLPPEHETHKGLLGTIMPRLVKSISGDRSHVLRFETPETMSRDRFFWFRDEEFARQTVAGLNPYSIRLVTEWPLRSKLDPEKYGPPESAITSEIINKEIGGFMTVEKAIQEKKLFMLDNHDLLLPFVNKVRKLKGTTLYGSRTLFFLNPEGTLRPLAIELTRPPSKSNGKGQWKQVFTPSWHSTSVWLWRFAKAHVLAHDSGYHQLVSHWLRTHCVTEPYVIATNRQLSEMHPINRLLHPHFRYTMEINALAREALINAEGTIESSFSPGKYSLELSSAVYALQWRFDMQALPADLIRRGMAVEDPFSPHGLKLTIEDYPFANDGLLLWDAIKLWVTDYVNHYYPEPSLVESDEELQAWWTEIRTAGHADKKDEPWWPVLRTPKDLIRILSTIIWVTSGHHAAVNFGQYVYGGYFPNRPTITRTKMPSEDPTEEEWKKFIANPERALLKCFPSQLQATRVMAVLDILSTHSPDEEYLGEKMEPSWGEDPVIKAAFEKFRERLKKLETLIDERNENTMLKNRNGAGIVPYELLKPFSKPGVTGMGVPCSISI 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02158 910 MobiDBLite consensus disorder prediction 260 297 - -
Pste1g02158 910 FunFam Lipoxygenase 542 909 - -
Pste1g02158 910 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 75 214 IPR036392 GO:0005515
Pste1g02158 910 Gene3D - 215 313 - -
Pste1g02158 910 PRINTS Lipoxygenase signature 545 562 IPR013819 GO:0016702|GO:0046872
Pste1g02158 910 PRINTS Lipoxygenase signature 563 580 IPR013819 GO:0016702|GO:0046872
Pste1g02158 910 PRINTS Lipoxygenase signature 583 603 IPR013819 GO:0016702|GO:0046872
Pste1g02158 910 Gene3D - 405 540 - -
Pste1g02158 910 SMART LH2_4 79 211 IPR001024 GO:0005515
Pste1g02158 910 Pfam PLAT/LH2 domain 145 209 IPR001024 GO:0005515
Pste1g02158 910 ProSitePatterns Lipoxygenases iron-binding region signature 2. 590 600 IPR020834 GO:0016702|GO:0046872
Pste1g02158 910 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 213 910 IPR013819 GO:0016702|GO:0046872
Pste1g02158 910 Gene3D PLAT/LH2 domain 51 214 - -
Pste1g02158 910 Pfam Lipoxygenase 223 893 IPR013819 GO:0016702|GO:0046872
Pste1g02158 910 SUPERFAMILY Lipoxigenase 215 910 IPR036226 -
Pste1g02158 910 PANTHER LIPOXYGENASE 74 910 IPR000907 GO:0016702|GO:0034440|GO:0046872
Pste1g02158 910 ProSiteProfiles PLAT domain profile. 90 210 IPR001024 GO:0005515
Pste1g02158 910 FunFam Lipoxygenase 423 559 - -
Pste1g02158 910 Coils Coil 854 874 - -
Pste1g02158 910 ProSitePatterns Lipoxygenases iron-binding region signature 1. 563 577 IPR020833 GO:0016702|GO:0046872
Pste1g02158 910 Gene3D - 542 909 - -
Pste1g02158 910 Gene3D - 314 403 IPR027433 -
Pste1g02158 910 PRINTS Plant lipoxygenase signature 498 522 IPR001246 GO:0016491
Pste1g02158 910 PRINTS Plant lipoxygenase signature 823 837 IPR001246 GO:0016491
Pste1g02158 910 PRINTS Plant lipoxygenase signature 277 296 IPR001246 GO:0016491
Pste1g02158 910 PRINTS Plant lipoxygenase signature 180 198 IPR001246 GO:0016491
Pste1g02158 910 PRINTS Plant lipoxygenase signature 342 363 IPR001246 GO:0016491
Pste1g02158 910 PRINTS Plant lipoxygenase signature 206 227 IPR001246 GO:0016491
Pste1g02158 910 PRINTS Plant lipoxygenase signature 391 407 IPR001246 GO:0016491
Pste1g02158 910 PRINTS Plant lipoxygenase signature 245 261 IPR001246 GO:0016491
Pste1g02158 910 PRINTS Plant lipoxygenase signature 430 449 IPR001246 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02158 Pste-Chr1 6923650 6930774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02158 153 910 Acyl Lipid Metabolism Gene Families AT3G45140 60.236 0.0 959
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02158 1 6923650 6930774 Pste1g02158 1 6923650 6930774 ECH