Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02150 CGTTGACAGCGAATAAAAGGAAAGAAAGATTAAGCAGAATCATCATATAGAAATGGCATGCAATGGGTTTTGCATTCTCGGTCTCATTGCTTTAGCTCTTGTGATTAGCACATCCAATGTTAATTCAACTGAAACTGATGCAGTTGAACCCGTTATTGATATAGCTTCGCTGAATCGGGATAGTTTCCCATCAGATTTCATCTTTGGAGCTGGATCATCATCATACCAGTTTGAAGGTGCAGCAATGGAAGGTGGTAGGGGACCAAGTATATGGGATACCTTCACCCATGAATATCCAGAAAAGATAACAGACAGAAGCAATGGAGATGCGGCCATTGATGCATATCACCATTACAAGGAAGATGTTAAGATGATGAAGGATATAAACTTGGATTCATACAGATTCTCGATTTCTTGGTCCAGAATCCTACCACAAGGAAAGCTAAGTGGAGGTATAAATCAAGAAGGAATCGACTACTATAACAACCTTATCAATGAATTAGTGGCTAATGGTATAGAACCATTTGTAACTCTTTTTCATTGGGATCTTCCCCAACCTTTAGAAGATGAATATGGTGGCTTCTTAAGTCCTCGCATAGTTAAAGATTTTCGGGATTATGCGGAACTTTGCTTCAAGGAATTTGGAGATAGGGTTAAGTATTGGGTTACGTTGAATGAGCCATGGAGTTACAGCAATAATGGCTATGCAAATGGAAAAATGGCACCGGGACGTTGTTCTGCTTGGATAAATTCAAATTGCACCGGTGGTGATTCTGGAACAGAACCATACTTAGTTTCACACTATCAACTACTTGCTCATGCAGCAGCCGTTCGTGTATACAAGACCAAATTTCAGGTATCACAAAAGGGTTTGATAGGAATCACCTTGGTAGCAAATTGGTACCTACCATTCTCGGATACCAAATCTGATCAAAGGGCAGTTAAAAGAGCAATTGACTTCATGTTTATGGATCCACTAACATTAGGAGACTACCCGAAAAGCATGCAGTCCCTTGTGAGAACACGATTACCTAAGTTTACTACAGAGCAATCTAAGCTACTTATTGGTTCATTTGACTTTATTGGCCTAAACTACTATTCTTCAACATATGCCTCTGACGCACCCCATTTAAGCAACGCTAGACCTAACTATGTAACAGATTCTTTGGTCGTTCCTGAATTTGAGCGTGATGGGAAACCCATAGGTATAAAGATTGCTTCTGATTGGTTATATGTTTGTCCGAGAGGAATTCGTGATCTTTTATTATACACGAAGGAAAAGTATAATAATCCTTTGATTTATATAACTGAAAATGTACGACACAATATGGCATTGATGAACGACTATTTCCTTCTTCCCCTCATTGCTATTGTTCTTGTTAGTTCTTTCAAAGTTAGATGCCAAGAAACAGTACTTACAGTTTCACCTATTATTGATATTTCAATCAATCGCAACACTTTCCCTCAAGGCTTCATCTTTGGCGCCGGATCTTCCTCTTACCAGTTCGAAGGTGCTGCAAAGGAAGGTGGTAGAGAACCAAGTGTATGGGATACCTTCACCCATAAATATCCAGAGAAGATCAACGATAGAAGCAACGGAGACGTGGCCATCGACTCATATCACCACTACAAGGAAGATGTTGGGATGATGAAGGATATGAATTTGGATTCATATAGATTTTCCATATCTTGGTCAAGGATCCTCCCAAAAGGAAAGTTGAGTGGAGGTATAAATCAAGAAGGAATCAATTATTACAATAACCTGATCAATGAGCTAGTTGCTAATGGTATCAAACCATTTGTAACTCTTTTTCATTGGGATCTTCCTCAAGCCTTAGAAGATGAGTATAATGGCTTTTTAAGTCCACGCATAGTGAAAGATTTTGGAGACTATGCGGAGCTTTGCTTCAAGGAATTTGGTGATAGGGTGAAGTATTGGGTTACTTTGAACGAACCATGGAGTTATAGTCAAAATGGCTATGCAAATGGACGAATGGCACCAGGTCGTTGTTCTGCTTGGATGAATTCAAATTGCACTGGTGGGGATTCTGCAATTGAGCCTTATTTGGTTACACATCACCAACTTCTTGCTCATGCAGCAGCTGTTCATGTGTACAAGACCAAGTATCAGGTGTCTCAAAAAGGTTTGATAGGCATAACCTTGGTAGCTAATTGGTTTTTGCCGCTTAGAGATACCAAATCTGATCAAAAGGCTACAGAAAGAGCAATTGACTTCATGTTTATGGATCCATTAACATCTGGAGACTATCCCAAAAGTATGCGATCCCTTGTTAGAACACGATTGCCAAAGTTTACTACACGACAAGCCAAACTACTTGTTGGTTCATTTGATTTTATTGGCCTAAACTATTACTCCACAACATACGCCTCCGATGCACCTCATCTAAGTAACGCCAGGCCTAGCTACTTAACAGATTCTCTTGTCACTCCTGCATATGAACGTGACGGAAAACCCATAGGAATAAAGATTGCTTCTGATTGGTTATATGTTTATCCAAAAGGAATTCGTGACCTTTTATTATATACCAAGGAAAAGTACAACAATCCTTTGATTTATATTACTGAAAATGGCTATACATCGCGATTCGGAATGATATTTGTGGATTACAAAAATGGTTTGAAAAGATACCAAAAGCTCTCCGCATTATGGTTCAAGAATTTTTTAAAAAAAGAACCTAAACTTTATGGTTCTATTAGATGCCAAGAAACAGTACTTACAGTTTCACCTATTATTGATATTTCAATCAATCGCAACACTTTCCCTCAAGGCTTCATCTTTGGCGCCGGATCTTCCTCTTACCAGTTCGAAGGTGCTGCAAAGGAAGGTGGTAGAGAACCAAGTGTATGGGATACCTTCACCCATAAATATCCAGAGAAGATCAACGATAGAAGCAACGGAGACGTGGCCATCGACTCATATCACCACTACAAGGAAGATGTTGGGATGATGAAGGATATGAATTTGGATTCATACAGATTTTCCATATCTTGGTCAAGGATTCTTCCGAAAGGAAAGTTAAGCGGAGGCATAAATCAAGAGGGAGTTGACTATTACAACAACCTTATCAATGAGTTAGTGGATAATGGTATACAACCACTTGTCACTCTTTTCCATTGGGATCTTCCCCAAGCATTAGAAGATGAATATGGAGGCTTCTTAAGTCCACGTATAGTGAAAGATTTTCAAGATTATGCGGAACTTTGCTTTAAGGAATTTGGTGATAGGGTGAAGTATTGGGTTACTTTGAACGAACCATGGAGTTATAGTCAAAATGGCTATGCAAATGGACGAATGGCACCTGGTCGTTGTTCTGCTTGGATGAATTTGAACTGCACAGGTGGTGATTCTTCAACAGAGCCTTATATAGTTACACATAATCAACTTCTTGCTCATGCAGTAGTTGTTCGTTTGTATAAGAACAAGTATCAGGCGTCTCAAAAGGGTTTGATAGGAATAACCTTAGTAGCTAATTGGTTTTTGCCGCTCAGAGATACCAAATGTGATCAAAAGGCTACTGAAAGAGCCATTGACTTCATGTTTATGGATCCATTAACATCTGGAGATTATCCAAAAAGTATGCGATCTCTTGTGAGAACCAGATTGCCAAAGTTTACTACAGAGCAAGCCACACTACTTGTTGGTTCATTTGATTTTATTGGTCTAAACTATTACTCTACCACATATGCTTCCGATGCACCTCATCTAAGCAATGCCAGACCTAGCTACTTAACAGATTCTCTTGTAATTCCTTCATATGAGCGTGATGGGAAACCAATAGGAATAAAGATTGCATCCGATTGGTTGTATGTTTATCCAAGAGGAATTCGTGACCTTTTATTATATACTAAGGAAAAGTATAACAATCCTTCGATTTACATCACTGAAAATGGTATAAATGAGTATAATGAATTGTCATTATCACTTGAAGAATCTCTTATGGATACATTCAGAATTGATTATCATTATCGTCATCTTTTTTATCTTCAATCAGCAATTAGGAATGGTGCAAATGTAAAAGGATATTACGTATGGTCTTTGTTCGATAATTTTGAGTGGTCTTCAGGCTATACGTCACGATTTGGAATGATTTTTGTGGATTACAAAAATGGTTTGAAGAGATATCAAAAGCTTTCTGCAATATGGTTCAAGAATTTTCTCCAGAAAGAAACAAGACTTTATGGTTCTAGTGAGGGAACACGAAGAAATGAGATGGCATTGAATTTGAACATGTTTCCGCTGCTCTGCGTTTTGTGTGTGTCTGTTACCCAGTCCATGTCCATTCTTGACGTATCTTATCTGAACCGGAGCAGTTTCCCCAAAGACTTTGTTTTCGGAACAGCCTCCTCCGCATATCAGTATGAAGGGGCTGCAAGGGGAAGTGGAAAAGGACCCAGCATTTGGGATACTTTCGCTCATACATTCCCACAAAAAATAAAAGATGGAAGTAATGGAGATGTAGCGGACGACTCATATCATCGCTACAAGGAGGACATTGGGATCATGAAGTATATGAATTTGGATGCTTATAGATTCTCCATTTCTTGGTCTAGGGTACTACCAAAAGGAAAGCTTAGTGCAGGTATAAACCATGAAGGAATAAACTACTACAACAACCTCATCAATGAGCTAATGGCTAATGGTCTGCAACCATATGTAACCCTTTTTCATTGGGACGTTCCCCAAGCCTTAGAGGATGAGTATGGCGGATTTTTAAGCCCTCAGATTGTAGATGATTTCAGGGACTATGGTGAACTTTGCTTTAAGGAATTTGGTGATAGGGTGAAACATTGGATTACTTTGAATGAACCAAGGAGTGTAAGCAAGAATGGCTATGCAAATGGCAGGTATGCTCCTGGTCGGTGTTCTGGTTGGCTAAAACTGAATTGCACAGGTGGTGATTCTGGAACTGAGCCTTATTTGACTTCACACTACCAACTTCTTGCTCATGCTGCTGCTGCCAAACTGTACAAGACCAAGTATCAGGCATCTCAAAAGGGTTTAATAGGGATTACCTTGAATTCTGACTGGTATGTTCCGGTTTCTAAAATGAAATCAGATCGAGATGCTGCACGTCGAGGCCTTGACTTCATGTTTATGGACCCTCTCACAAAAGGTGAGTATCCAAAAAGCATGCGGTCGATGTTGGGAAACCGGTTACCAGAGTTCTCCAAAGAAGAATCCAGGCAACTTAAAGGGTCATTTGATTTTCTGGGCCTAAACTACTACTCATCCTTTTATGCTGCCAATACACCTCACCAGCACGGAGCCAGACCAGCCCTACAAACTGATGCTCTTGTTAATGTTACAAATCAGCGTGACGGAAAGCTCCTTGGTCAGATGAAGCAATACGACAACCCCGTAATTTACATTACTGAAAACGGTTATGATGAGTTCAACGATCCAACGCTATCTCTTGAAGAAAGCCTTATAGATACTTACAGAGTTGATTACTTGTATCGTCATCTTTATTATCTTCAAACTGCAATCAAATATGGTGTGAATGTAAAGGGATACTTTGTATGGTCATTGCTGGATAACTTGGAATGGGACTCTGGCTATACTGTACGATTTGGACTCGTTTTTGTGGATTTCAAAGATGGCTTGAAAAGATACCCGAAACTCTCGGCACATTGGTTCAAGAATTTCCTCAGTAAATCTTAGACATATATATTGATCATGGTTCCAAGATATGAGATATGTAATTCAGGTTTTAAATATAAGTTATATGAAATTTACTCGTTCTTAGGGGAAATAAAAGAATTGTTACTACAAAAGTTGGCGCATTTGTTAGATGGTTGAATTATTTAAACATGCATATTGATAAG 5847 0.3913 MACNGFCILGLIALALVISTSNVNSTETDAVEPVIDIASLNRDSFPSDFIFGAGSSSYQFEGAAMEGGRGPSIWDTFTHEYPEKITDRSNGDAAIDAYHHYKEDVKMMKDINLDSYRFSISWSRILPQGKLSGGINQEGIDYYNNLINELVANGIEPFVTLFHWDLPQPLEDEYGGFLSPRIVKDFRDYAELCFKEFGDRVKYWVTLNEPWSYSNNGYANGKMAPGRCSAWINSNCTGGDSGTEPYLVSHYQLLAHAAAVRVYKTKFQVSQKGLIGITLVANWYLPFSDTKSDQRAVKRAIDFMFMDPLTLGDYPKSMQSLVRTRLPKFTTEQSKLLIGSFDFIGLNYYSSTYASDAPHLSNARPNYVTDSLVVPEFERDGKPIGIKIASDWLYVCPRGIRDLLLYTKEKYNNPLIYITENVRHNMALMNDYFLLPLIAIVLVSSFKVRCQETVLTVSPIIDISINRNTFPQGFIFGAGSSSYQFEGAAKEGGREPSVWDTFTHKYPEKINDRSNGDVAIDSYHHYKEDVGMMKDMNLDSYRFSISWSRILPKGKLSGGINQEGINYYNNLINELVANGIKPFVTLFHWDLPQALEDEYNGFLSPRIVKDFGDYAELCFKEFGDRVKYWVTLNEPWSYSQNGYANGRMAPGRCSAWMNSNCTGGDSAIEPYLVTHHQLLAHAAAVHVYKTKYQVSQKGLIGITLVANWFLPLRDTKSDQKATERAIDFMFMDPLTSGDYPKSMRSLVRTRLPKFTTRQAKLLVGSFDFIGLNYYSTTYASDAPHLSNARPSYLTDSLVTPAYERDGKPIGIKIASDWLYVYPKGIRDLLLYTKEKYNNPLIYITENGYTSRFGMIFVDYKNGLKRYQKLSALWFKNFLKKEPKLYGSIRCQETVLTVSPIIDISINRNTFPQGFIFGAGSSSYQFEGAAKEGGREPSVWDTFTHKYPEKINDRSNGDVAIDSYHHYKEDVGMMKDMNLDSYRFSISWSRILPKGKLSGGINQEGVDYYNNLINELVDNGIQPLVTLFHWDLPQALEDEYGGFLSPRIVKDFQDYAELCFKEFGDRVKYWVTLNEPWSYSQNGYANGRMAPGRCSAWMNLNCTGGDSSTEPYIVTHNQLLAHAVVVRLYKNKYQASQKGLIGITLVANWFLPLRDTKCDQKATERAIDFMFMDPLTSGDYPKSMRSLVRTRLPKFTTEQATLLVGSFDFIGLNYYSTTYASDAPHLSNARPSYLTDSLVIPSYERDGKPIGIKIASDWLYVYPRGIRDLLLYTKEKYNNPSIYITENGINEYNELSLSLEESLMDTFRIDYHYRHLFYLQSAIRNGANVKGYYVWSLFDNFEWSSGYTSRFGMIFVDYKNGLKRYQKLSAIWFKNFLQKETRLYGSSEGTRRNEMALNLNMFPLLCVLCVSVTQSMSILDVSYLNRSSFPKDFVFGTASSAYQYEGAARGSGKGPSIWDTFAHTFPQKIKDGSNGDVADDSYHRYKEDIGIMKYMNLDAYRFSISWSRVLPKGKLSAGINHEGINYYNNLINELMANGLQPYVTLFHWDVPQALEDEYGGFLSPQIVDDFRDYGELCFKEFGDRVKHWITLNEPRSVSKNGYANGRYAPGRCSGWLKLNCTGGDSGTEPYLTSHYQLLAHAAAAKLYKTKYQASQKGLIGITLNSDWYVPVSKMKSDRDAARRGLDFMFMDPLTKGEYPKSMRSMLGNRLPEFSKEESRQLKGSFDFLGLNYYSSFYAANTPHQHGARPALQTDALVNVTNQRDGKLLGQMKQYDNPVIYITENGYDEFNDPTLSLEESLIDTYRVDYLYRHLYYLQTAIKYGVNVKGYFVWSLLDNLEWDSGYTVRFGLVFVDFKDGLKRYPKLSAHWFKNFLSKS 1876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02150 1876 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 474 488 IPR033132 -
Pste1g02150 1876 Pfam Glycosyl hydrolase family 1 42 421 IPR001360 GO:0004553|GO:0005975
Pste1g02150 1876 Pfam Glycosyl hydrolase family 1 467 848 IPR001360 GO:0004553|GO:0005975
Pste1g02150 1876 Pfam Glycosyl hydrolase family 1 1426 1875 IPR001360 GO:0004553|GO:0005975
Pste1g02150 1876 Pfam Glycosyl hydrolase family 1 907 1379 IPR001360 GO:0004553|GO:0005975
Pste1g02150 1876 SUPERFAMILY (Trans)glycosidases 464 879 IPR017853 -
Pste1g02150 1876 FunFam Beta-glucosidase 12 456 848 - -
Pste1g02150 1876 SUPERFAMILY (Trans)glycosidases 1417 1874 IPR017853 -
Pste1g02150 1876 SUPERFAMILY (Trans)glycosidases 904 1377 IPR017853 -
Pste1g02150 1876 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 914 928 IPR033132 -
Pste1g02150 1876 Gene3D Glycosidases 457 848 - -
Pste1g02150 1876 Gene3D Glycosidases 31 430 - -
Pste1g02150 1876 Gene3D Glycosidases 897 1378 - -
Pste1g02150 1876 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
Pste1g02150 1876 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 1432 1446 IPR033132 -
Pste1g02150 1876 ProSitePatterns Glycosyl hydrolases family 1 active site. 1281 1289 IPR018120 -
Pste1g02150 1876 Gene3D Glycosidases 1408 1876 - -
Pste1g02150 1876 FunFam Beta-glucosidase 12 896 1378 - -
Pste1g02150 1876 Gene3D Glycosidases 849 886 - -
Pste1g02150 1876 FunFam Beta-glucosidase 12 1413 1875 - -
Pste1g02150 1876 PANTHER GLYCOSYL HYDROLASE 909 1380 IPR001360 GO:0004553|GO:0005975
Pste1g02150 1876 FunFam Beta-glucosidase 12 31 433 - -
Pste1g02150 1876 SUPERFAMILY (Trans)glycosidases 35 421 IPR017853 -
Pste1g02150 1876 PRINTS Glycosyl hydrolase family 1 signature 1778 1786 IPR001360 GO:0004553|GO:0005975
Pste1g02150 1876 PRINTS Glycosyl hydrolase family 1 signature 1801 1812 IPR001360 GO:0004553|GO:0005975
Pste1g02150 1876 PRINTS Glycosyl hydrolase family 1 signature 1846 1858 IPR001360 GO:0004553|GO:0005975
Pste1g02150 1876 PRINTS Glycosyl hydrolase family 1 signature 1205 1219 IPR001360 GO:0004553|GO:0005975
Pste1g02150 1876 PRINTS Glycosyl hydrolase family 1 signature 1822 1839 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02150 Pste-Chr1 6856948 6900226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02150 428 883 Glycoside Hydrolase AT5G44640 48.054 2.78e-155 485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02150 1 6856948 6900226 Pste1g02150 1 6856948 6900226 ECH