Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02140 CGGCGTTAGACGCCAATCAACATGCAACAATCTCATCCGTTCCACACACTCCCAAAGCACCCACCACACACCATGAAGTACATCTTCATGCTTGCAATTGCCCTCCTACTATTTCGTAATGTCGATACTACCCCTCATATTCCTTCCTCTACCCTCCCCACAGTTGCTTTTCTCATTCACAAAAGACCTTGTTTTGGGAATTCACTGCTTCATCAGTTGTTGCAAACTTATTTGAGGTTCAGCTTCTAACTCTATCCTCGTTATTCCACATTCCACAATATATTTTTTCAGTTCAGCGTTCAAATTCTTAATTCGAAAAAAAAGTTCCAATGTCGAAAGGATAAAAGAACACCTCTTCTCTAGCTTTCAGTACTTACTCCTTGTCCTGAAGAAAATGTACGAGGAATCTACAAATATAAAAGATTACCTTAAGCCTATACAATTACTTATTCATTCTGTTTCCTTTCTTTTTTTGCTTCACCATCAACTCTAACGTAGAAAAAGTATCGTGCTTGAACTAAAAATTTGTACCTGCCATGATGGATCGTGGTCAAGATAAAACTGTACCTGCTGGTAGTGACTTCTCCCTGAAGAAGAAGGAGCTTCTTTCTAGTGCCATGAAGAGAACAAGTGAATGGATTTTTTCTCAGGAGATTCCAAGTGATGTCAACGTTCAGGTCGGGGAAGCTTCCTTTTCGTTGCATAAGGTATCAACCAATATTCAAACACGGACTCTACGGGTAACCAACTATGGATTTCTTACTCTTAACGAGTTCACTCAGAACAAACTGAGCTTTACCCTTCTTTTTTATTGTTCACACGATGTAAAGCTTACTATACTGTCGAGTTCATACCAAATTTATGAGTCTCGGTTTCCATTAGTCTCCAAGTGTGGATACATTAGGAAACTGGTTTCAGAGTCTAATGATGCTGACGTTTCACTTATTGAAATCTCTGATGTTCCTGGAGGAGCTGAAGCGTTTGAACTGGCAGCAAAGTTCTGCTACAGGATAAACTTCGAAATAAACGTGGAAAACATTGCTACTCTACGCTGCGTGGCTGAGTATCTTGAGATGACGGAGGACTATTCAGTTGGAAACTTGGTGGGAAGGACTGATGCATACTTGAATGAAGTGGCACTCAAGACCATTGCAGGGGCTGTGTCTGTCTTGCACTTGTCAGAGAACCTCCTTCAAATAGCAGAGAGAGCAAAGTTGGTGAGTCGATGTATAGATGCCATTGCATATATAGCTTGTAAGGAAAGCCAATTCTGTTCTGCAAGAAGTGACAGTGGAGTGGTGTCTTCCATGGCATCAAACCAGAGACCAGTAGTTGATTGGTGGGCTGAAGATCTGACTGTGCTTAGAATTGACATTTTCCAAAGAGTTATAATTGCAATGATGGCAAGAGGGTTTAAACAGTATGCCATTGGTCCCATACTAATGCTCTATGCACAGAAATCTCTACGAGGTTTGGATGTATTTGGAAAGGCCATGAAGAAGATTGAGCCGCGACAAGAGCATGAAAAAAGGGTTGTTTTAGAGACAATAGTGAGTCTTTTACCAAGGGAGAGAAATGCAATGTCAGTAAGCTTTCTTTCTATGCTGCTTCGGGCAGCAATATATCTTGAGACTACAGTTGCCTGCAGGCTTGACTTGGAGAAGAGGATGGCCATGCAGTTAGGACAGGCTGTTTTGGATGATCTTCTCATTCCTTCCTATTCTTTCACTGGGGAAACATTGTTTGACGTAGATACAGTGCAGAGGATCATGAATAATTACTTAGAATCTCAAACGGGAAACCACTCAGTCTACAATGCAGATGACGAATACTTTTCTCCTCCACAGAGTGATATGGAGAGGGTTGGAAAACTAATGGAGAACTACCTAGCGGAAATAGCCACAGACCGAAATTTACCAGTTACAAAGTTCACCAGTTTGGCAGAATTAATTCCTGAACAATCAAGACCTACAGAAGATGGAATGTATAGAGCCATAGACATTTATCTTAAGGCCCATCCTGCTCTAAGTGACATGGACAGAAAGAAAGTTTGCAGTGTGATGGACTGTCAGAAGTTATCGCGAGAGGCATGTGCACATGCTGCTCAAAATGACCGGCTACCTGTTCAAACAGTTGTTCAAGTTCTCTATTATGAACAGCAACGCCTTCGCAATGCCATGAATGGCAGTGGAAGTGGGGAATCTTCGGTTGATTCCAAACTCAACGTATACTCCACTGATCTTCATCCGGTTTCAAATGAACTCTCTACGTTGCGTAGAGAAAATGAAGACCTGAAATTAGAACTAGTGAAATTGAAAATGAGACTCAAAGAGATTGAAAATTCCACACTAAAATCAGCATCTAATAGTCCTGCTGTAAGTGCTTCACCTTCTGCTGATAAGCCTCCTTTGCCTCGAAGATCATTCATAAGTTCAGTGTCCAAAAAACTTGGGCGGCTTTCTCCTTTTGTGCGTGCCGATGGTGTTACACCTTTTGCTAAAGGTCGCACAAAACCAAATAAGAATCGACGCCACTCCATTTCCTGAAGCTGTTGGTAGTTCCTTGTGTGCAGACTAAAGGTTCTTCCTTAGATTCAGGGGTTTGAAAATACAGGATTAGTCTTTTCAAGTTTTTGTTTCGTTTATGTGATACCATGTAGATTGTATGATTATGATCTTTTTTTGCTAACTATATTGTAAAGTGTGATGAAAAATTAAATATAGTTGG 2727 0.4089 MMDRGQDKTVPAGSDFSLKKKELLSSAMKRTSEWIFSQEIPSDVNVQVGEASFSLHKVSTNIQTRTLRVTNYGFLTLNEFTQNKLSFTLLFYCSHDVKLTILSSSYQIYESRFPLVSKCGYIRKLVSESNDADVSLIEISDVPGGAEAFELAAKFCYRINFEINVENIATLRCVAEYLEMTEDYSVGNLVGRTDAYLNEVALKTIAGAVSVLHLSENLLQIAERAKLVSRCIDAIAYIACKESQFCSARSDSGVVSSMASNQRPVVDWWAEDLTVLRIDIFQRVIIAMMARGFKQYAIGPILMLYAQKSLRGLDVFGKAMKKIEPRQEHEKRVVLETIVSLLPRERNAMSVSFLSMLLRAAIYLETTVACRLDLEKRMAMQLGQAVLDDLLIPSYSFTGETLFDVDTVQRIMNNYLESQTGNHSVYNADDEYFSPPQSDMERVGKLMENYLAEIATDRNLPVTKFTSLAELIPEQSRPTEDGMYRAIDIYLKAHPALSDMDRKKVCSVMDCQKLSREACAHAAQNDRLPVQTVVQVLYYEQQRLRNAMNGSGSGESSVDSKLNVYSTDLHPVSNELSTLRRENEDLKLELVKLKMRLKEIENSTLKSASNSPAVSASPSADKPPLPRRSFISSVSKKLGRLSPFVRADGVTPFAKGRTKPNKNRRHSIS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02140 669 ProSiteProfiles NPH3 domain profile. 267 543 IPR027356 -
Pste1g02140 669 Pfam NPH3 family 267 519 IPR027356 -
Pste1g02140 669 PANTHER OS12G0117600 PROTEIN 38 619 IPR043454 -
Pste1g02140 669 Coils Coil 576 603 - -
Pste1g02140 669 MobiDBLite consensus disorder prediction 649 669 - -
Pste1g02140 669 MobiDBLite consensus disorder prediction 604 631 - -
Pste1g02140 669 SUPERFAMILY POZ domain 94 182 IPR011333 -
Pste1g02140 669 Gene3D Potassium Channel Kv1.1; Chain A 82 189 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02140 Pste-Chr1 6820495 6824016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02140 9 492 EF-hand Containing Proteins AT2G47860 39.723 4.18e-104 323
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02140 1 6820495 6824016 Pste7g00947 7 8793869 8798019 PCT