Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02076 ATTTAAGAGCACGATGGGGTACAATTTGGTGTTCATCGGTGTGCTATTATGGTGTGCCATGGTTAATGGATTAGCCATTAGTTCCTCAGCTAATTATGACTATGCAGATGCACTTGGCAAAGCAATATTGTTTTTTGAAGGACAACGCTCAGGGAAATTGCCCACCAGCCAAAGAGTGAAATGGAGGGGGGACTCAGCTCTCTCTGATGGCAAACTTCAAAATGTGAATTTGACTGGAGGATACTACGATGCTGGTGATAACATCAAGTTTGGATGGCCAATGGCATTTACAACCACCTTATTGAGTTGGGCTGCTGTAGAGTACCAGAGTGAGATATCTTCAGTGAACCAACTTGGTTACCTTCAAGGTGCCATCCGTTGGGGTGCAGACTTCATATTGAAAGCCCACACTTCCCCAACCACCCTCTACACACAGGTGGGAGATGGAAACGCTGATCACAATTGTTGGGAGCGCCCGGAAGACATGGATACACCAAGAACAGTGTACAAGATAGATGCTAATTCCCCAGGAACTGAAGCCGCAGCTGACTCTGCTGCTGCTCTTTCTGCTGCTTCAATTGTCTTCAAGAAAATAGATGCCAACTATTCCTCCAAGCTATTAAGCCATTCAAAATCACTGTTTGATTTTGCAGACAAGTACAGAGGTTCTTACTCCAGTTCTTGCCCGTTCTATTGCTCGTACTCAGGTTACCAGGATGAACTGTTATGGGCTGCTTCTTGGCTATACAAGGCCAGTGGAGAAATCAAGTACTTGAGCTACACCATACACAACCAAGGTTGGAGTCATGCGGAATTCTATGATGGGAAGAAAGACTTGGCCAAGATTAAGAGTGACGCTGAATCATTTATATGCGCAGTGATGCCAGGAAGTAGCTCTCTACAGATTAAAACAACTCCTGGTGGCCTTCTGTTTACTAGAGATAGTAGTAATCTGCAATATGCCTCGAGCTCAACCATGGTGCTATTCATTCTCTCTAAAACACTAAGCAGAAATGATATCAGTGGAATCAATTGTGGCTCAGCGCATTTCACACCGTCACAAATTAGAGCCTTTGCGAAAACACAGGTGGATTACATACTAGGAAACAATCCCATGAAGATGTCGTACATGGTGGGATTTGGAAGTAAATACCCAAAGAAATTACATCACAGAGGCTCGTCCATCCCTTCAATCAAAGTTCACCCGGCCAAGGTGGGTTGCAATGATGGTCGCTCTGATTATTACGATTCTGCTAATCCAAATCCCAATACTCATGTGGGTGCCATTGTTGGAGGCCCTGATTCTAATGACCAATTCAATGATGCAAGATCTGACTATTCTCACAGCGAACCAGCCACCTATCTCAATGCCGCTTTCGTGGCTTCAGTGTCTGCTTTGCTTCCAACAACTTCTCAAACCAAATTGAGGACTCTCAGTTTCCCCCAGATCGGTGCTAGGGAAACTAATCTAGTTACTTAATGTAATGATATTATTACTGATTGTGTTAGTCACACAACCATGTTAAGAAATTTCACATAGAAAGCCATTACAAATAATTGCTAGGAATTTTAGGTTCACCCCACTCTATCAATCTTACTATTGTCATTATAAA 1613 0.4327 MGYNLVFIGVLLWCAMVNGLAISSSANYDYADALGKAILFFEGQRSGKLPTSQRVKWRGDSALSDGKLQNVNLTGGYYDAGDNIKFGWPMAFTTTLLSWAAVEYQSEISSVNQLGYLQGAIRWGADFILKAHTSPTTLYTQVGDGNADHNCWERPEDMDTPRTVYKIDANSPGTEAAADSAAALSAASIVFKKIDANYSSKLLSHSKSLFDFADKYRGSYSSSCPFYCSYSGYQDELLWAASWLYKASGEIKYLSYTIHNQGWSHAEFYDGKKDLAKIKSDAESFICAVMPGSSSLQIKTTPGGLLFTRDSSNLQYASSSTMVLFILSKTLSRNDISGINCGSAHFTPSQIRAFAKTQVDYILGNNPMKMSYMVGFGSKYPKKLHHRGSSIPSIKVHPAKVGCNDGRSDYYDSANPNPNTHVGAIVGGPDSNDQFNDARSDYSHSEPATYLNAAFVASVSALLPTTSQTKLRTLSFPQIGARETNLVT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02076 488 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 361 387 IPR018221 -
Pste1g02076 488 SUPERFAMILY Six-hairpin glycosidases 27 470 IPR008928 GO:0005975
Pste1g02076 488 Pfam Glycosyl hydrolase family 9 30 457 IPR001701 GO:0004553|GO:0005975
Pste1g02076 488 Gene3D - 24 476 IPR012341 GO:0005975
Pste1g02076 488 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 435 453 IPR033126 -
Pste1g02076 488 PANTHER ENDO-1,4-BETA-GLUCANASE 10 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02076 Pste-Chr1 6508222 6511212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02076 10 466 Glycoside Hydrolase AT4G23560 67.017 0.0 640
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02076 1 6508222 6511212 Pste1g02076 1 6508222 6511212 ECH