Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02032 GTTAAAGTTTATCGAACCATTGTACCTACTAGTATTCCATTGTATCGGGTCGTATCTAGGGCACGCACTCAAAGAGTTCAATTTTCACTCTCACAAACAATTCCCCAAACTCCTCCCTCCTTCTTCAATGGCGGATTCCGCCTCTTCCCCGGCAACGGCAACCGCAACGGCAACGGCAACCCTACCCTCCGAATCCGCACCCTCAAACCAACCCGATCCACTTCCCCAGTCCCGGGCGTCATCCTCCCTCGTTCAGGCTGCTCGCCCTCAGGTGCCCCAATTCTCCCTGTCCCTGTCCCTGCCCCTAATCCCGCCTACCAAAACCCTACCGTTCCGCCGCCCGGCGTGGCAAGCGCCGCTGCCGCAGTTCCGCAGATGCAGCCCATGATGTCGTACCAGCTTCAGCCCGGTAACCCCGCCCTGCGACCCTTCCCTCCGATCCCTAATGGTTATGCTGCTGCTCCGACCGTAAATCCCGCGGTAGGCCACTTTCTGCTAGTTATAAGAGTACTTTCCCTTCAATGGCTTTATGAATTCCAGAAGCCGACAATGTTGTCATTTCAGCTGGTGATTGTTGGCTGTGCTGCCATCTCTGTTATGCTTTTGATGTGTGGAATTCCCCGTTACCCTCCTCCTTATGGAACTATGGTTCGTCCTGTGTTTCCTCCACGCCCTCCTGGAGCAGTTAATATGCCTCCAGTATCACGCCCGCCTGTTGCAGGGATTCCTACAGTTCGCCCAATTATTCCTCCTGTTATCAGACCTATGGTGCCTCCTAGTGTTACCCCAGCTGAGAAGCCTCAAAACACAGTATACATTGGCAAGATTGCACCAACTGTGGAAAATGAGTTCATGCTGTCTCTCCTTCAATTATGCGGGACTATCAAGACCTGGAAACGTCCTCAGGATTTATCAACTGGAACTCCTACACGTTTTGGGTTATATGAGTTTGAGTCCGCAGAAGGTGTTCTCCGTGCCTTACGTCTCCTTACTAAATTGAATATTGATGGGCAAGAACTAAAGGTCAATGTGAACCAAAATATGAAAGAACATCTGGAGCAGTATGTTCAGAAAAAAACTGAGACCTTGAAGAACAAAGAATTGCAGGCTGGAGTAGTTGAAAACGATGAAGGTGAACAACCTTCTAATGTAAACAAGGATGCAAAGGCTGACACAGAACCCTCAACTAAAGAGGATAGTGAATCAGCGAACAAGGATTCCCATGATGTGGCAACCTTTGGAATTGTCACTGAAGAAGATAGAGAAGCTGATCGCGAGGCTCTAGAAAAGATCACCAAGATGATAGAGGAAAGGTTGAAGACAAGACCGTTGCCTACACCACCTGCACAGCCAACTGCTGATGGTTCTGTGAATTTAACTTCAGAACCTGTCAAAACAAGAGATGGGGACTCTGTTGTGGATACAGAGAAGAATGAATCTGCTGAAAATAAAAATGGGAAAGAGACAAACAATGATAACAAACCAACCAGTGAACATGATAGGCCTGAAAGCCCTGATAGAAGGCATGATAGAAAAAACAGAGAGAGGGACCGTGACAGGGAACTAAAACGAGAGAAGGAAAGAGAACTTGAAAGATATGAAAGAGAAGCAGAGCGGGAGCGTGTTCGGAAAGAGAGGGAACAAAGGCGAAGGCTTGACGAGGCGGAGCGTCAATATGAAGCATATTTGAAGGAATGGGAGTATAGAGAACGAGAGAAAGAGAAAGAGCGCCAGTATGAAAAAGAGAAAGAGAAAGATAGGGAACGTAAAAGGAGGAAGGAGATACTTTATGATGAAGAGGATGAGGATGAGGATTCTAGGAAGAGGTGGCGCAGAAGTGTAATAGAGGAGAAGAGAAAGAAGAGGCTGCGTGAGAAGGAAGATGACCTGGTTGACCAACAAAAAGAGGAGGAAGAAATTGTTGAGGCCAAGAAGAAGGCTGAGGAAGAACAGAAACGGCAAAGAGATGCTTTAAAGCTATTATCTGAGCAGGTGGTAAATGGTGGTAATGAAAATATGATTACTGAAGAGCTTACTAATGAAATCAAAAGCATTGTTGCTGAACAAGATACCATTGCAGATTATAGTCGGGAAGATAATATTGGTGACGGTAATTCACTTAGTGTCATCAATGATGAATCAACCATAGCATCTGTTGCTCCAATTGATACACAGTCAGGTGGGGTTGCTCCTACAAAGAAATTGGGGTTTGGTCTTGTTGGTTCAGGGAAAAGAACAACTGCTCCTTCTGTTTTCCATGAAGAGGAGGATGATGATGCACACAAGGACAAAAAAATGAGACCATTGGTTCCAATCGATTACTCAACTGAAGAACTGCAGGCTGTTCAACCTATGGTTTCTGGGCCAACACCACCAAATTTGGCTGCTGCTGCAGAATTTGCGAAGCGTATATCCAGTACAAATTTCAAGGAAGATAAGCAGGATGGAGAACGGGATAGAAGTAGGCGTTCTAATGAGAAGTCCAACTACCGGGACAGGGACAGGAGTGATGAAGATGGCGCTCACAACAGAGATGAAAACAAGGAGAGGATTGCTGATCGTGACAGAGATCGAGATCATGGATCGGAGAAACTTAAGACTTCTGATAACAAGAGGCTTTTGGATGCAAAACAATTGATTGATATGATACCCAAGACCAAGGAGGAGTTGTTCTCATATGAGATAGACTGGACAGTGTATGATAAGCATCAATTACATGAGAGAATGAGACCGTGGATTTCAAAGAAAATCAAAGAGTTTTTGGGGGAGGAAGAAACTACGTTGATAGATTATATTGTTTCCAGTACACAAGAACATGTGAAAGCATCTCAAATGCTTGAGCGTCTTCAGATCATTTTGGATGAAGAGGCTGAAATGTTTGTTCTGAAGATGTGGAGGATGCTTATCTTCGAAATAAAGAAGGTAGAGACAGGGCTAGCTTTGAGGTCAAAATCATGATTTTTTATTACTGTATGCACTTCTCTTTTCTGCGGGATTCTTATTTTAACCTTGATCCTTGACATGTCTTTACTCTAAATTGTAAAATGGCTGCATAATCACAAACGGTTGAGTGTAATTTTTTAGTCTGTATTTGCTTCAGAATTTAAGTAGCTATCCTGATAAACCCCCGTTTTCTTAAACCATGAGAATCCGGTGGCAATTTTTGTCATGTGAATAGTTTAGAACTTTGACTATTTTTAGTGATTGTCCTGGACTCCTGCATCTTTCATTTCTTTAGAAATAAGAAATACTGTAAAAAATTACCCATTTAATTTTTATTCTTGTCTAGCCAATTGGG 3298 0.4409 VKVYRTIVPTSIPLYRVVSRARTQRVQFSLSQTIPQTPPSFFNGGFRLFPGNGNRNGNGNPTLRIRTLKPTRSTSPVPGVILPRSGCSPSGAPILPVPVPAPNPAYQNPTVPPPGVASAAAAVPQMQPMMSYQLQPGNPALRPFPPIPNGYAAAPTVNPAVGHFLLVIRVLSLQWLYEFQKPTMLSFQLVIVGCAAISVMLLMCGIPRYPPPYGTMVRPVFPPRPPGAVNMPPVSRPPVAGIPTVRPIIPPVIRPMVPPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQLCGTIKTWKRPQDLSTGTPTRFGLYEFESAEGVLRALRLLTKLNIDGQELKVNVNQNMKEHLEQYVQKKTETLKNKELQAGVVENDEGEQPSNVNKDAKADTEPSTKEDSESANKDSHDVATFGIVTEEDREADREALEKITKMIEERLKTRPLPTPPAQPTADGSVNLTSEPVKTRDGDSVVDTEKNESAENKNGKETNNDNKPTSEHDRPESPDRRHDRKNRERDRDRELKREKERELERYEREAERERVRKEREQRRRLDEAERQYEAYLKEWEYREREKEKERQYEKEKEKDRERKRRKEILYDEEDEDEDSRKRWRRSVIEEKRKKRLREKEDDLVDQQKEEEEIVEAKKKAEEEQKRQRDALKLLSEQVVNGGNENMITEELTNEIKSIVAEQDTIADYSREDNIGDGNSLSVINDESTIASVAPIDTQSGGVAPTKKLGFGLVGSGKRTTAPSVFHEEEDDDAHKDKKMRPLVPIDYSTEELQAVQPMVSGPTPPNLAAAAEFAKRISSTNFKEDKQDGERDRSRRSNEKSNYRDRDRSDEDGAHNRDENKERIADRDRDRDHGSEKLKTSDNKRLLDAKQLIDMIPKTKEELFSYEIDWTVYDKHQLHERMRPWISKKIKEFLGEEETTLIDYIVSSTQEHVKASQMLERLQIILDEEAEMFVLKMWRMLIFEIKKVETGLALRSKS 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02032 985 SUPERFAMILY RNA-binding domain, RBD 243 349 IPR035979 GO:0003676
Pste1g02032 985 SMART pwi_2 901 974 IPR002483 GO:0006397
Pste1g02032 985 MobiDBLite consensus disorder prediction 451 465 - -
Pste1g02032 985 SMART rrm1_1 270 343 IPR000504 GO:0003723
Pste1g02032 985 Gene3D - 262 374 IPR012677 -
Pste1g02032 985 Gene3D PWI domain 864 980 - -
Pste1g02032 985 MobiDBLite consensus disorder prediction 623 654 - -
Pste1g02032 985 MobiDBLite consensus disorder prediction 467 554 - -
Pste1g02032 985 Coils Coil 569 589 - -
Pste1g02032 985 FunFam RNA Binding Motif protein homolog 864 980 - -
Pste1g02032 985 MobiDBLite consensus disorder prediction 749 767 - -
Pste1g02032 985 ProSiteProfiles PWI domain profile. 888 985 IPR002483 GO:0006397
Pste1g02032 985 Coils Coil 349 369 - -
Pste1g02032 985 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 269 347 IPR000504 GO:0003723
Pste1g02032 985 MobiDBLite consensus disorder prediction 780 799 - -
Pste1g02032 985 MobiDBLite consensus disorder prediction 380 424 - -
Pste1g02032 985 Coils Coil 509 565 - -
Pste1g02032 985 MobiDBLite consensus disorder prediction 436 554 - -
Pste1g02032 985 MobiDBLite consensus disorder prediction 723 767 - -
Pste1g02032 985 SUPERFAMILY PWI domain 906 973 IPR036483 GO:0006397
Pste1g02032 985 MobiDBLite consensus disorder prediction 570 608 - -
Pste1g02032 985 Pfam PWI domain 908 971 IPR002483 GO:0006397
Pste1g02032 985 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 271 341 IPR000504 GO:0003723
Pste1g02032 985 CDD RRM_RBM25 269 352 IPR034268 -
Pste1g02032 985 MobiDBLite consensus disorder prediction 805 869 - -
Pste1g02032 985 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 85 985 - -
Pste1g02032 985 Coils Coil 616 664 - -
Pste1g02032 985 MobiDBLite consensus disorder prediction 369 424 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02032 1 6352522 6359049 Pste1g02032 1 6352522 6359049 ECH