Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01936 ATTTGGATAAAGTAACCGGTGTGGTCGTTATGGCTGATAATCAAAGAGCCTGAAAAGTGTTGATCAATGAAGGCTTTCTCTTCCTCAAATCCATGTCTTCCCAAAACCCATTTCCTCAAAGTTCCTACCTTTCACCCTTTCTTGAGATTCCATACCAATGGTGCAAAGAGACCTCACACACTGTCATTCACCATCAGCTGCAAGATGAAAAACAAAGGGAAGAGTGTGTCACAGAAGATTGTCTTGTCAGAAGCTTCCCCTCCTCCACTCACTGAGGATGATGACGTTCCAGAAATCATCAAGAAAAAGGGAGGCCCGTTTTGGGTGGCCAAGATTCTGAGAAGGAAGACTTTGCAGATTCTCTCTAATTTGCCATTGGCTATTGGGGAAATGTTCGCTGTTGCTTCTTTAATGGCTTTGGGCACAATCATTGATCAAGGTGAAGCCCCTGACTTTTATTTCCAGAAATACCCTGAAGATCACCCTGTGTTTGGATTTTTTACTTGGAGATGGGTTCTCACCCTTGGTTTTGATCACATGTTTTCATCCCCTATATTTCTTGGAGTGTTGGCTCTACTGGGTGCATCCCTCATGGCCTGCACTTACACAACTCAGCTCCCCCTCATCAAGGTTTCCAGAAGGTGGTCATTTTTGCACTCCGCTGAGGCCATACGTAAGCAGGAATTTTCAGAATCGTTGCCAAGAGCATCAATCCAAGATGTTGGTACTATATTGATGGGAGCTGGATACGAGGTATTCTTGAAAGGACCATCTTTATATGCTTTTAAAGGGCTTGCAGGTCGGTTAGCCCCAGTTGGAGTCCATATAGCAATGATACTGATAATGGCTGGAGCAACTCTTAGTGCTGCTGGGAGCTTCAGAGGTTCAGTCACTGTGCCCCAGGGGCTGAATTTTGTTGTAGGTGATGTCCTGGCTCCTTCTGGCTTTCTCTCCTCTCCAACCGAGGCTTTTAATACAGAGATTCATGTTAACAAATTCTACATGGATTATTATGAGAGCGGAGAGGTTTCACAGTTCCACACTGATCTTTCCCTTCGTAACATGGATGGGGAAGAAGTAATGAGGAAAACAATCAGTGTAAACGATCCTTTAAGATATGGTGGCATCACCATATATCAGACAGATTGGAGTATTTCAGCTCTTCAAATTCTTAAGGACAATGAAGGACCTTATAATTTGGCTATGGCACCTCTACAGATAAATGGAGATAAGAAACTTTTTGGTACTTTTCTACCAGTTGGAGATATTAATTCCCCTGACGTTAAGGGAATATCAATGCTTGCTCGTGATTTGCAGTCAATTGTCCTTTATGATAAGGAAGGAAAATTAGCAGGAGTTAGACGACCTAATTCAAAGCTTCCAATCAATATTGATGGCTCAGAAATTGTCATCGTTGATGCAATAGGAAGCAGTGGCTTGGACTTGAAGACTGACCCGGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTGATGATAACTACTTGCATCAGCTATTTGTCTCATTCACAGATATGGGCCTTACAAGATGGGACAGCAGTCTTCATTGGAGGGAAGACTAACAGAGCAAAGATTGAATTTCCAGAGGAGATGAACCGATTACTTGACAAGGTCCCTGAGATAGTTGAGTCAACTCTATCTAAGCAAGCTGATAGCATTAGTGGTTAGCTTATGGCTTTTGAGAAATCCAGGTGGGTAAAGAAGACTCTTGAATTGGATGATTGCAACTTATAAGGATTATGATCCAATTTCGGTAAACTTGTCAATTATCACTTACAGAAGAAGAAATAATAAAGAAACATGAATCATACTTATCTTATAAATTAAACTCACTCTATGCATCTCAAATTCTTTAGAAGTTTTTCATAGAACTCTCAAAAGCTGAGATGGATAACTTGAAAGAAATTTGATTCATTTTCTTTCTATTTCTTTTTTATTAAATGCTTATTGAAAAATTTACTCAACCTATAGAAGTGATAAAAGTTCTTTGGCAAAAATACGACTTGAACATCGTCAATGAGGTGCCCATCAGTTTTCTTGTTGGTTGATCAGCCAAGGAATTTACAAATGCTTGAAGGATGCTTTGGGGAAGTAAATCAAGAAAACTTTTGCAGCTCATTATATGACATTATCTAGATACACTGAGTTCAACATACATGTATATTTCCTGTAATTTCATAGCCATATTAATCAAAACTTGTATGTCTTGTGTCATTTTTGTCCCTCATTTAAGTAATTGACAAGTGTATCAGGTTGAATATGATA 2286 0.3981 MKAFSSSNPCLPKTHFLKVPTFHPFLRFHTNGAKRPHTLSFTISCKMKNKGKSVSQKIVLSEASPPPLTEDDDVPEIIKKKGGPFWVAKILRRKTLQILSNLPLAIGEMFAVASLMALGTIIDQGEAPDFYFQKYPEDHPVFGFFTWRWVLTLGFDHMFSSPIFLGVLALLGASLMACTYTTQLPLIKVSRRWSFLHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPSLYAFKGLAGRLAPVGVHIAMILIMAGATLSAAGSFRGSVTVPQGLNFVVGDVLAPSGFLSSPTEAFNTEIHVNKFYMDYYESGEVSQFHTDLSLRNMDGEEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKLAGVRRPNSKLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTAVFIGGKTNRAKIEFPEEMNRLLDKVPEIVESTLSKQADSISG 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01936 540 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 92 521 IPR023494 -
Pste1g01936 540 Pfam ResB-like family 104 368 IPR007816 -
Pste1g01936 540 Pfam ResB-like family 405 516 IPR007816 -
Pste1g01936 540 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 50 529 IPR023494 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01936 15 535 Miscellaneous Gene Families AT1G49380 67.837 0.0 763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01936 1 6018510 6023329 Pste1g01936 1 6018510 6023329 ECH