Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01927 CACTAACCACAATCGCAATCACGACCATACCTCTGACTCCCATCTAATCTCACTGTTCAACCAAACAAGGTACAGCCTCACTTTCCCACTTCCACCGACTCCATTGTGCTTTGTTGATCTCAATGTCTCTCTGGGGCTGACAAAATGCCACAAGCTTGAACAAAGGTACATTCATTTTGAGCCAAATTGTCAAAAATCATTCTTTTATTGGGTCATCGATTTCAAGGACAAAACAGCTGGCAGAGTCCAGCTGTTTTTGTCTGCATCAGTACAAGAAACCCGGTGGCTGGAGTGATTCTTTTATGAAGGTGTCTTGTTTTGCCAATCCTGGCTTGTTGATATCTTATATGTTGCCAATTTATTGAGGAGGCAATTCTGGAAGAGGCATTGCAGTTATTTTCCTTTTGTAGTCTGTGGCTGTTTTTGATATAGGATATGGCTGTTCTTACACCTGGAAGTTCATATTTTGGAGCAAAGTATCTGGCTCTAGGACCATTGAGAATATTAAGGGGTCTGGTGTGTCTACTGTTGCTTCTTTCAACAGCATTTATAATGTTAGTGTTCTTTGGTTTTATAAGTGCTGTTATTGTGCGACTTTTTAGCATCAGTTGCAGCAGGAGAGCAACTTCCTTTTTCTTTGGTGCTTGGCTAGCCTTGTGGCCTTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATATTGTTCCCTCAAGAGAACGGATCTTACTGATTGCAAATCATAGAACTGAGGTGGACTGGATGTACTTATGGGACCTTGCCTTGCGGAAGGGATGCCTTGGATATGTAAAATATATACTTAAGAGCAGTTTGATGAGACTCCCAGTTTTTGGTTGGGCATTTCACATACTAGAGTTCATCCCAGTGGAAAGAAAGTGGGAGGCTGATGAGTCAATCATGCGCTGTATGCTTTCAACATTCAAGGATCCCCAAGATCTTCTCTGGCTTGCACTTTTCCCAGAAGGCACTGATTTCACTGAGCAAAAGTGCCTTAGGAGTCAAAAATATGCTGCTGAACATGGGTTACCGGTTCTGAAAAATGTTTTACTTCCAAAGACAAAGGGTTTTTGCGCCTGCTTGCAAGAGTTGAGGGGCTCTCTCACGGCAGTTTATGATGTGACCATTGGCTACAAATACCGCTGCCCATCTTTCTTGGATAACGTCTTTGGGGTGGATCCTTCGGAAGTTCATATTCATATATGCCGCTTCCCCCTTGATAGTATCCCAGCATCTGAAGACAAATTGTCTACGTGGTTGATAAATAGATTCCAGTCAAAGGATCGTTTACTTTCCAATTTTCAAATTCAAGGACAGTTTCCGGATCAAGCGACAGAAGGAGATCTCTCTGCTGTGAAGTGCATTTTAAATTGTATGACAATTGTTACTGTAACAGGTACATGCATGTACTACAGTTTTTCCTCTGTCTGGTTTAAACTTTATGTCTCTCTGGTCTGTGTTTATTTGGTTCCAGCCACATACTTTAATATCCGGCCGCAACCCATTCTTAGCATTTTGAAGAGGAGACCAAAAGGCCACCTCATAAATTCATGAATAGGTAGAAGGCACTGTGTCTGTTGTATGACTGTTGATATAGTTTATCAGCGTTGGACTTGTGCAATTAGTGTAATATTTGGTTCAATGTAACTGAATAAGGTCCTAACTAGAACTTTCAAATTTATTAGAATGTAACTGAATATAGTAAATATACTG 1740 0.4075 MAVLTPGSSYFGAKYLALGPLRILRGLVCLLLLLSTAFIMLVFFGFISAVIVRLFSISCSRRATSFFFGAWLALWPFLFEKINKTKVVFSGDIVPSRERILLIANHRTEVDWMYLWDLALRKGCLGYVKYILKSSLMRLPVFGWAFHILEFIPVERKWEADESIMRCMLSTFKDPQDLLWLALFPEGTDFTEQKCLRSQKYAAEHGLPVLKNVLLPKTKGFCACLQELRGSLTAVYDVTIGYKYRCPSFLDNVFGVDPSEVHIHICRFPLDSIPASEDKLSTWLINRFQSKDRLLSNFQIQGQFPDQATEGDLSAVKCILNCMTIVTVTGTCMYYSFSSVWFKLYVSLVCVYLVPATYFNIRPQPILSILKRRPKGHLINS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01927 381 CDD LPLAT_LCLAT1-like 76 265 - -
Pste1g01927 381 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 19 354 - -
Pste1g01927 381 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Pste1g01927 381 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 30 244 - -
Pste1g01927 381 SMART plsc_2 100 214 IPR002123 GO:0016746
Pste1g01927 381 Pfam Acyltransferase C-terminus 254 308 IPR032098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01927 Pste-Chr1 5982344 5987140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01927 14 365 Miscellaneous Gene Families AT1G75020 61.473 3.61e-160 452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01927 1 5982344 5987140 Pste1g01927 1 5982344 5987140 ECH
Pste1g01927 1 5982344 5987140 Pste7g01134 7 10467004 10472371 ECH