Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01923 ATGATCGCTTACTGTTTTGCGTCTCAGCACTCCTACGTGGAACCTCCATTGCCATTACTCCTTTTTTTCAAAAGCATGGATGGTGAATTGGTTGATGAGGCAGCCCAATTGGAGGTTGATGAGGACTCGCAGCGACAGAACAAAGATTCACCTAACATCTTAAAATCTCAAGAAGCCTTTATCCCTGTTAAGCAGGACTATCCACAGTTAAAAACTCGGGAATATGATGACATTCTACAAGGTAAAAATGCAGTTGAAGGTATCGACCATGCAAATACATCACAGCATCGTCGTGGAAGCCTTTTTATGGATGATGCTGATGTTATGGTTGAAGAATTGACAGTAAAAAGTTACAATGGCTCAAACTTGGATATTGGTACATCTAACAACCGTGAGCAAATGTATAATCGGCAGAGCCATTGGCAGAATCTTTATCAGCTGGCAAGTAATTCAGGAATTGGAAATTCATTAAGTGATATTGGAACCCGAAACAGTTTCCAGGCTACATCTAGTGCTCGGGAGGATATTGGATCCTCATCTTTCCCGGAGATTTTAGCTAGAAAATCTCTCAGTGATGGCCAGAGCAACGTCATGGAACAGTTGACAGCTGCTGAAAATAGTGAGGGCACAGGTGATGTTCGTCAAGGAATGCGGACAAAAATTATATCCCAATCAGGATTTGCTGAGTTTTTCATAAAAAATACGCTGAAGGGTAAGGGAATTGTATATAAAGGCCCCTCTTATGATTCCTTCTGTGCTCAGTCTAGAGAGCAAAACCAGATTAAGACTGGCATTGATACAGATCAAAATCAGATGAGGAGTGGCATTGGCACAGATCAGAATCAGATGAGGACTGGCATTGGCACAGAACAGAATCAGATGAAGACTGGCTTTGCCACAGATCAGAATCAGATGAAGACTGGCTTTGCCACAGATCAGAATCAGATGAAGACTGGCATTGTTACAGATCAGAATCAGATGAAGACTGGCATTGGCACAGATCAGAATCAGATGAAGAATGGTATTAGCACTGATCAAAAACAAATGAAAATTGGTATTGGTACTAACTTGAACTCTAATCAATCAGTGGGCTACGGTTCTAAACCTACAAAGTTTCCTTCTTATGATGGTGGTATGCCTAGATCTGGCAGGTCTGAATGTGATGGTGTGACTTTGAGAGAATGGTTGAGGCATGGGCACCACAAAGCAAACAAAGTGGAAAGTTTGAATATATTTAGGAAAATTCTTGATTTGGTGGACAACTCTCACTCTCAGGGAGTTGCATTGCATAACCTATGCCCATCTTATATTAAATTGATGCCATCAAACCAGGTCATGTACCTTGGTATACCTGTTCAAAAACAGATGGTGGATAACGTTGTAAATTCTGAAGTTGTTCACTTAGATGATCCTTTTACTAGAAAAAGGCTTTCGAAACAAGTAACATTTCCCTCTCTTGATATGGGAACAAAGAAACAAAAATTTAATGAGAAATTGAGAATTACTGGTGGTGACTGTCTAGAAACTGCAAGTGATAGGAAACTTCATAGTCATACAGTTGGATCACAAGATTATTACAATGAATATGAGGAAGATACCCAATTTTCTAAATATAGAATTGGAAGAATGTCTAGCATCCTGCATGTATCTAATACAGGTCAAATGCCATTGACTTCATGTGAAAAATTGGAATATAAATGGTACACAAGTCCTGAGGGAGGTTACACAACATCATCAAATATCTACTGTCTTGGTGTCCTTCTTTTTGAGTTACTTGGTCATTTTGACTCTGCACGAACACATGTTGCAGCAATGTCTGATCTTCGTCATAGGATTCTTCCTCCAATTTTCCTGTCAGAAAATCCAAAGGAAGCTGGCTTTTGTCTTTGGCTGCTGCATCCTAAACCATCATCACGTCCAACAACAAGGGAAATCCTTCAATCTGAACTGATTCATGGATTGCAAGAGTTGTTTAGTGAGGAATTGTCATCAAGTATTGATCAAGAAGACGCAGAATCAGAATTGCTATTGCATTTCCTTGTTTTGTTAAAAGAGCAGAAGCAGAACAATGCCTTCAAACTGGCAGAAGAAATCAAGTGCTTGGAATCAGATATAGAAGAGGTGGAAAGGAGGCATGATTCAAGAAAATCCTTGGTTTCTTCTGGTTTGCAGAATGATTACTCTTGTCAGAAGGAGATTATGCCTCTTAAAAAGGAATCTTTAAGTTTAGAAATTCTGCCCTCAGTATCTCCAATCTCTAATTCAAATGAAGTGGGATTGATGAGAAATATATACCATCTTGAAAGTGCTTATTTTTCCATGAGATCCAAACTTCAGCTTTCTGAAACAGATGCTTCAACTCACCCTGATAAAGATATACTAAGAAATCGTGAGAACTGGCATATGGCCCAAAAAGGCGAGGAACAACCTAAAAGGAAAGATACTTTAGGTGCATTCTTTGATGGCTTGTGCAAGTATGCACGTTATTGGAAGTTTGAAGTTCGGGGTGTACTAAGAAATGCTGATTTTAACAACCCTGCAAATGTAATTTGCTCTCTAAGCTTTGATCGGGATGCAGATTACTTTGCTTCTGCTGGGATATCTAAGAAAATAAAAATTTTTGAGTTTAGTGCACTTTGCAATGACTCTGTTGATATCCATTATCCTGCTGTTGAGATGTCAAACAGATCAAAACTCAGCTGTGTTTGCTGGAATAACTATATTAAGAACTATCTTGCTTCTACGGATTATGATGGTATAGTGAAGTATAATTTGATGCCTTTTCAGTTATGGGATGCTAGTACAGGTCAAGAATTTTCTCAATTCACTGAACATGAGAAGAGGGCTTGGTCTGTTGACTTCTCTGTAGTATGTCCTACAAAATTTGCCAGTGGAAGTGATGATTGTACCGTCAAGCTGTGGAGCATCAGTGAGAGGAACTGTTTAGGCACAATCAGGAATGTCGCTAATGTCTGCTGTGTTCAATTCTCTGCTCATTCCTCCCATTTGCTGGCCTTTGGATCTGCAGACTACTCAACATATTGTTATGATCTTCGCAATCTTAGAAGTCCCTGGTGTGTATTGGCCGGCCATCATAAGGCTGTGAGCTATGTCAAATTCTTGGACTCTGAAACACTTGTTTCTGCTTCTACTGATAATACATTGAAGATCTGGGATCTCAATAAAGCCTCTCCCAATGGTGCATCCATTAATGCTTGCAGCCTAACCCTGTCAGGACATACTAACGAGAAGAATTTTGTGGGTCTGTCGGTGGCTGATGGATATATTGCATGTGGTTCAGAAACAAATGAGGTTTACACCTACTATAGATCGCTTCAGCTGCCAATTACTTCGCACAAGTTTGGGTCGATTGATCCCATTTCTGGAAAAGAGACTGATGAAGACAACGGTCAGTTTGTTTCGAGTGTGTGCTGGAGAGGGAAATCAGACATGCTTATTGCGGCCAATTCAAGTGGATGTGTAAAAGTGTTACAGATGGTTTAAAGGAAGGTTCACTGTGGCGGTGGCTTTCTTACAGTTTTGTGAGTTCCTGGAAGGCACTCAGCCCAATGGCCCCAATCCCATCAAACTGTTGGGAGCGTGTAAAAAACTCTAGACATCTTCAGCTTTTCCTCTGCCTTATAATTTGAGGCAGATGGGCTTCTGTTTCGGCCACTGAGAAATAGATCTGCAATCAAAATCCTAATCTTTTTGAAAGTTGGATTCATCATGATGTGCAACACGGACTTCAAACGAAAATTTCATGTTGTCACTTATAGAAAAGGCTTGTTATACTTAAACATGGCTGGGATAAATCCGAAAAGCAGAGTGAATATCAAACAGATTAAGGTCCGGTCCACTCTAGATAAATTTCTGAACAAGTATTTGTCAGAGGAAAATAAATCAAATTTCTCTTACGAGTTAACATCAATTTATGTACATCAGTTTCTTTCTTTCTTTTTATAAAAAGTTAATTTCTTCCATTTATTTTTTTTTTCAAAAAACTGATGTGCGTAATTTAATTTTAACTTTTGGTGGAAATTTGATTCAATATCTCCAAATCTTCTCCTTTTTATTGATAAAATTATCTAAATTGGGATTAGGATTTTAGAATTGTAATGGCTAGTGCTAAGCTGCCCTGTATCTATGCGAAGTTGCCTGCACGGTGTGCCAATGTAAATTGTCTTACTGTCCTTTTCAGATTCTTTTTCTTTAATTAGTGAAGGACTAGCAATTGTAAGTTGTAGGAAAAATGATTATTTATCAAAAGATAAAGCAACTTCAGGTGTATACTACCCATTTATTTATTTATTTTCTGGGGGCAACGCTTCAACTCCTTTATTACCTAG 4349 0.3884 MIAYCFASQHSYVEPPLPLLLFFKSMDGELVDEAAQLEVDEDSQRQNKDSPNILKSQEAFIPVKQDYPQLKTREYDDILQGKNAVEGIDHANTSQHRRGSLFMDDADVMVEELTVKSYNGSNLDIGTSNNREQMYNRQSHWQNLYQLASNSGIGNSLSDIGTRNSFQATSSAREDIGSSSFPEILARKSLSDGQSNVMEQLTAAENSEGTGDVRQGMRTKIISQSGFAEFFIKNTLKGKGIVYKGPSYDSFCAQSREQNQIKTGIDTDQNQMRSGIGTDQNQMRTGIGTEQNQMKTGFATDQNQMKTGFATDQNQMKTGIVTDQNQMKTGIGTDQNQMKNGISTDQKQMKIGIGTNLNSNQSVGYGSKPTKFPSYDGGMPRSGRSECDGVTLREWLRHGHHKANKVESLNIFRKILDLVDNSHSQGVALHNLCPSYIKLMPSNQVMYLGIPVQKQMVDNVVNSEVVHLDDPFTRKRLSKQVTFPSLDMGTKKQKFNEKLRITGGDCLETASDRKLHSHTVGSQDYYNEYEEDTQFSKYRIGRMSSILHVSNTGQMPLTSCEKLEYKWYTSPEGGYTTSSNIYCLGVLLFELLGHFDSARTHVAAMSDLRHRILPPIFLSENPKEAGFCLWLLHPKPSSRPTTREILQSELIHGLQELFSEELSSSIDQEDAESELLLHFLVLLKEQKQNNAFKLAEEIKCLESDIEEVERRHDSRKSLVSSGLQNDYSCQKEIMPLKKESLSLEILPSVSPISNSNEVGLMRNIYHLESAYFSMRSKLQLSETDASTHPDKDILRNRENWHMAQKGEEQPKRKDTLGAFFDGLCKYARYWKFEVRGVLRNADFNNPANVICSLSFDRDADYFASAGISKKIKIFEFSALCNDSVDIHYPAVEMSNRSKLSCVCWNNYIKNYLASTDYDGIVKYNLMPFQLWDASTGQEFSQFTEHEKRAWSVDFSVVCPTKFASGSDDCTVKLWSISERNCLGTIRNVANVCCVQFSAHSSHLLAFGSADYSTYCYDLRNLRSPWCVLAGHHKAVSYVKFLDSETLVSASTDNTLKIWDLNKASPNGASINACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYTYYRSLQLPITSHKFGSIDPISGKETDEDNGQFVSSVCWRGKSDMLIAANSSGCVKVLQMV 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01923 1167 ProSitePatterns Trp-Asp (WD) repeats signature. 1046 1060 IPR019775 -
Pste1g01923 1167 SMART WD40_4 1126 1165 IPR001680 GO:0005515
Pste1g01923 1167 SMART WD40_4 1021 1059 IPR001680 GO:0005515
Pste1g01923 1167 SMART WD40_4 831 875 IPR001680 GO:0005515
Pste1g01923 1167 SMART WD40_4 885 924 IPR001680 GO:0005515
Pste1g01923 1167 SMART WD40_4 978 1017 IPR001680 GO:0005515
Pste1g01923 1167 SMART WD40_4 935 975 IPR001680 GO:0005515
Pste1g01923 1167 SMART WD40_4 1070 1109 IPR001680 GO:0005515
Pste1g01923 1167 Pfam WD domain, G-beta repeat 937 975 IPR001680 GO:0005515
Pste1g01923 1167 Pfam WD domain, G-beta repeat 1027 1059 IPR001680 GO:0005515
Pste1g01923 1167 ProSiteProfiles Trp-Asp (WD) repeats profile. 942 984 IPR001680 GO:0005515
Pste1g01923 1167 PANTHER PROTEIN SPA1-RELATED 2 33 1167 IPR044630 GO:0009640
Pste1g01923 1167 SUPERFAMILY WD40 repeat-like 843 1165 IPR036322 GO:0005515
Pste1g01923 1167 SUPERFAMILY Protein kinase-like (PK-like) 387 657 IPR011009 -
Pste1g01923 1167 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1028 1061 - -
Pste1g01923 1167 ProSiteProfiles Trp-Asp (WD) repeats profile. 1028 1068 IPR001680 GO:0005515
Pste1g01923 1167 Coils Coil 684 711 - -
Pste1g01923 1167 Gene3D - 820 1167 IPR015943 GO:0005515
Pste1g01923 1167 Gene3D Transferase(Phosphotransferase) domain 1 387 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01923 Pste-Chr1 5969773 5985092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01923 962 1108 Miscellaneous Gene Families AT5G08390 28.859 1.01e-06 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01923 1 5969773 5985092 Pste1g01923 1 5969773 5985092 ECH