Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01913 GAAATAGCAAGCGAGAATTCACAGATCACACGTTATGTGGACTGTGGAGGCGCGGTGATATATAAAAGAGACAATACTCGCTCTTCAAAAGAGAAATCCTTCCAGAACAAGAAAATTTTCAATTCTGTTATACGGTTAATTAGTTACGATCCTTTCTCTCACCAATGGCGTCGGAAGCAAAGCCTGCCGACGGTGCGAAACCCCCAACTCACGAGCTTCTCAGCATCTGCAAGTCTCTCGTCGCCGGCGGAGTTGCCGGAGGAGTGTCGCGAACTGCTGTAGCTCCCCTGGAGAGATTGAAGATTCTTCTGCAGGTTCAAAATCGTCAAAATATAAAATACAGTGGAACAATTCAAGGCTTAAAATATATATGGAAAACTGAGGGTTTTAGAGGAATGTTTAAAGGAAACGGAACTAATTGTGCTCGTATTGTCCCAAATTCAGCAGTGAAGTTCTTTAGCTATGAGCAAGCTTCCAAGGGTATTTTATGGCTGTACCAGAGGCAACCTGGAAACGAAGAAGCACAGCTCACTCCTATTCTGCGTCTTGGAGCTGGCGCATGCGCAGGAATCATTGCCATGTCTGCAACTTATCCTATGGACATGGTGCGAGGAAGGCTAACTGTCCAGACAGAAGCATCTCCTCGTCAATACAGAGGAATTTTTCATGCTCTTTCAACAGTCTTCCGAGAAGAAGGCCCTCGAGCTTTGTATAAAGGCTGGCTACCTTCAGTCATAGGAGTTATACCGTATGTGGGTCTTAATTTTTCCGTATATGAGTCTCTCAAAGACTGGTTGGTTCGATCTAAACCATTTGGAATAGCTCAAGACTCTGAGCTAAGTGTGACGACAAGGCTTGCATGTGGGGCTGCTGCTGGAACTGTTGGCCAGACTGTGGCTTATCCCCTTGATGTGATTCGCCGAAGAATGCAAATGGTTGGCTGGAAAGATGCTGCTTCGGTAGTCACTGGAGAGGGGAAGAGCAAAATTGAGTACACAGGCATGGTTGATACATTCAGGAAAACTGTGCAGCATGAAGGATTTGGAGCATTATACAAGGGCCTAGTTCCCAATTCAGTGAAGGTGGTCCCTTCTATAGCTATTGCTTTCGTGACATACGAGATGGTCAAGGACATTCTTGGTGTACAAATGAGAATATCTGACTGAAGAATTAGCAATTCGCTTTTGCGCTTTTATTGAAATTAGCAGAAATGTTAGAATCAGAAGGTAATTTATTATTTCATTTTCTGTTAATGGAATTAGAAGATCCAATTGTATAAAAGTAGCAGTGACTGTATATCCTATACATATATCATCTTTTCTCTGCATATAATTTTCATTCAGAGGCAATAAGTTTTCTTTGAGGAACCACGCTGTATGCATTGATACAGGCTTACCAG 1399 0.4303 MASEAKPADGAKPPTHELLSICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNRQNIKYSGTIQGLKYIWKTEGFRGMFKGNGTNCARIVPNSAVKFFSYEQASKGILWLYQRQPGNEEAQLTPILRLGAGACAGIIAMSATYPMDMVRGRLTVQTEASPRQYRGIFHALSTVFREEGPRALYKGWLPSVIGVIPYVGLNFSVYESLKDWLVRSKPFGIAQDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVVTGEGKSKIEYTGMVDTFRKTVQHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVQMRISD 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01913 333 SUPERFAMILY Mitochondrial carrier 17 320 IPR023395 -
Pste1g01913 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Pste1g01913 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 106 IPR018108 -
Pste1g01913 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 324 IPR018108 -
Pste1g01913 333 PANTHER SOLUTE CARRIER FAMILY 25 20 327 - -
Pste1g01913 333 Gene3D Mitochondrial carrier domain 16 328 IPR023395 -
Pste1g01913 333 FunFam Mitochondrial substrate carrier 17 327 - -
Pste1g01913 333 Pfam Mitochondrial carrier protein 224 325 IPR018108 -
Pste1g01913 333 Pfam Mitochondrial carrier protein 123 213 IPR018108 -
Pste1g01913 333 Pfam Mitochondrial carrier protein 20 105 IPR018108 -
Pste1g01913 333 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Pste1g01913 333 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Pste1g01913 333 PRINTS Mitochondrial carrier protein signature 81 101 IPR002067 GO:0055085
Pste1g01913 333 PRINTS Mitochondrial carrier protein signature 24 37 IPR002067 GO:0055085
Pste1g01913 333 PRINTS Mitochondrial carrier protein signature 37 51 IPR002067 GO:0055085
Pste1g01913 333 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01913 Pste-Chr1 5934073 5939052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01913 25 325 EF-hand Containing Proteins AT5G51050 39.203 4.84e-67 217
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01913 1 5934073 5939052 Pste1g01913 1 5934073 5939052 ECH