Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01895 GAGAAAACGATTTGTTTAGGTCGGGAGAGAGAGAGAGAGAGTATGGGGGTTCCTACCATGTGTGAGTGAGACTAATTAGTCTACGGTGACGAAAGCCTTTGGTCTATATAAGCACGCTGGCCGAAGCTCTCAGTCGTATGCCTATACTCTGCTGCTTCACTTGTCATTGTACTTGTTACTTTGATATATATGACCCATTTTAACAAGCTTTCTCTAATCTGTCTCGGCCTCTAATATATTTTATCTTCTGCGGATATTCAGCTAAACGAAGAAGATGACTGAGGGAAAGGTAGTGGAAGCTACACTAGACGATTTTGATCCTCCAAAGAAGCCCAAACGGAACAAGTATGCTTTTGCCTGTGCTATGTTGGCTTCCATGACTTCCATCTTGCTTGGTTACGATATCGGAGTGATGAGTGGAGCAGCGAAGTACATAAAAAGGGACCTGAAAGTGTCGGACGTGCAGATCGAGGTGCTGGTGGGAATCATAAATCTGTATTCTCTGATAGGGTCATGCCTGGCGGGCAGAACCTCGGACTGGATAGGAAGGCGTTACACGATAGTATTCGCGGGTGTCATATTCTTCGTGGGAGCACTCCTCATGGGCTTCTCCCCTAACTATGCCTTTCTCATGTTTGGCCGTTTCGTCGCCGGCATTGGCATCGGTTACGCTCTCATGATCGCCCCCGTCTACACCGCCGAGGTCTCCCCGGCCTCCTCTCGTGGCTTCCTTACTTCCTTCCCTGAGGTTTTTATCAATGGAGGGATATTACTGGGATACATATCCAACTATGCATTTTCGAAGATGACGCTCAAGTTGGGATGGCGAATGATGCTTGGAATAGGTGCAATTCCCTCAGTAATCCTAACGGTGGGAGTGTTGGCGATGCCGGAGTCTCCACGATGGCTGGTGATGAGGGGCCGTTTGGGGGAGGCAATAAAAGTGCTTAACAAAACCTCCGACACCAAGGAAGAGGCTCAGCAAAGGTTAGCGGACATCAAAGAAGCCGCAGGAATCCCGGAGAATTGCAACGACGACGTCGTTCAGGTTGAGGTAACAAAACGAAACACGGGTGAGGGCGTATGGAAAGAGTTGTTCCTCTATCCAACACCCGCGATTCGTCATATCTTAATCGCCGCCCTCGGGATTCACTTCTTCCAACAAGCGTCTGGGGTAGACGCCGTCGTTTTGTACAGCCCAAGGATCTTCGAAAAGGCTGGGATCAAGAGCGACACTGATCAGCTTCTCGCAACCGTCGCCGTTGGATTCGTCAAGACCGTCTTCATCTTGGTCGCTACTTTTATGTTGGACCGCGTCGGCCGTCGTCCCTTGTTATTGTCCAGTGTGGGGGGCATGGTGCTCTCGCTTCTCACGCTCGCCATCACCCTCACCGTCATTGATCACACCGATAACAAACTTATGTGGGCCGTCGGATTGAGCATAGCCATGGTCTTGGCTTACGTGGCCACCTTCTCCATCGGTGCGGGACCCATCACCTGGGTCTACAGTTCTGAAATATTTCCGTTGAGGCTGCGGGCGCAGGGTGCGGCCGCGGGTGTTGTGGTCAACAGGACCACAAGTGGGGTTATCTCAATGACTTTTCTGTCCCTGGAGAAAGCAATCACCATTGGTGGCGCTTTCTTCCTTTTTTCTGGGATTGCTACCATTGGCTGGATATTCTTTTACACCGTGCTTCCTGAAACGCGGGGTAAGACGCTGGAAGATATGGAAGCCTCGTTTGGTAATTTTCGCTCCAAACCCAACACCGCCAAGCAACTGCACAGTGGGTATGCCAATGCCCAACTACAGCTAGGGACCACTGTCCAAACTTAAAACAAATGTCTGTGAGACATCCACTAGTAATTTCCGTGTTTTTACTTCATAGACTAGTAATGCCAAGTAACAACACCTATGCAGGCAAAAATAATTTTTATGAATCACAAAGGTTGAAAAAACGGCTCTTTTTTACAGCTTTTTTTTTTTAATGAAATTTCCTTCGAGATTTAAGAAACGTGTTTTCCGT 2024 0.4872 MTEGKVVEATLDDFDPPKKPKRNKYAFACAMLASMTSILLGYDIGVMSGAAKYIKRDLKVSDVQIEVLVGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGVIFFVGALLMGFSPNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKMTLKLGWRMMLGIGAIPSVILTVGVLAMPESPRWLVMRGRLGEAIKVLNKTSDTKEEAQQRLADIKEAAGIPENCNDDVVQVEVTKRNTGEGVWKELFLYPTPAIRHILIAALGIHFFQQASGVDAVVLYSPRIFEKAGIKSDTDQLLATVAVGFVKTVFILVATFMLDRVGRRPLLLSSVGGMVLSLLTLAITLTVIDHTDNKLMWAVGLSIAMVLAYVATFSIGAGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLEKAITIGGAFFLFSGIATIGWIFFYTVLPETRGKTLEDMEASFGNFRSKPNTAKQLHSGYANAQLQLGTTVQT 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01895 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 478 IPR020846 GO:0022857
Pste1g01895 519 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 24 491 IPR045262 GO:0015144
Pste1g01895 519 ProSitePatterns Sugar transport proteins signature 2. 125 150 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste1g01895 519 CDD MFS_PLT 32 485 IPR044776 GO:0005351
Pste1g01895 519 Pfam Sugar (and other) transporter 30 489 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste1g01895 519 NCBIfam sugar porter family MFS transporter 19 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01895 519 Gene3D MFS general substrate transporter like domains 19 492 IPR036259 -
Pste1g01895 519 FunFam probable polyol transporter 4 19 492 - -
Pste1g01895 519 ProSitePatterns Sugar transport proteins signature 1. 83 100 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste1g01895 519 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01895 519 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01895 519 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01895 519 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01895 519 PRINTS Sugar transporter signature 120 139 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01895 519 SUPERFAMILY MFS general substrate transporter 15 486 IPR036259 -
Pste1g01895 519 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01895 Pste-Chr1 5869423 5871678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01895 16 518 Organic Solute Cotransporters AT3G18830 71.400 0.0 753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01446 7 13258021 13260815 Pste1g01895 1 5869423 5871678 ECH
Pste1g01895 1 5869423 5871678 Pste1g01895 1 5869423 5871678 ECH