Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01889 CCAAAAATGACATCCGATGGGCTTGGAGAGGGTGGGATCTAAGAGAAGAGATTGATATCTCACTGCCTCGTAGTTTCGGAGTTTCAAGTTTCAACAATGGTACCTCAAGCTTTGTCTGTGCCTGCGAGTGCCAGCTTCACCGTCGCTTCTCGCACCAGAAGCTCTTCCCACCTTCTATTTTCTCACAGAAATCCGTGCTCGTTAGCTTCTTCCTTGCCAACCCCATATGGTCATTCATCAGAAGTTGGGTTATCAAGTAAAAGCCGTGGCTTTCCTTTAAAGCTTGATGAGAAAAATATCCATGGTGCTAGTACAAGTTATGGTGCAATTGAAGCCAAGAAGGGAAACCCACCAATAACACCAGCAGTGATGACTCCTGGAGGACCTCTTGATCTCTCATCTGTTTTGTTCAGGAATCGTATAATATTCATAGGACAGCCAGTCAATTCACAAGTGGCTCAGAGAGTTATATCACAGCTTGTGACTCTAGCTACTATTGATGAAAATGCAGATATACTGGTATATATAAACTGCCCTGGTGGAAGCACATATTCGGTGTTGGCTATTTATGATTGCATGTCTTGGATAAAGCCCAAGGTAGGTACTGTGTGTTTTGGAGTAGCTGCAAGCCAAGGGGCACTGCTCCTTGCTGGTGGAGAGAAGGGAATGCGGTATGCAATGCCAAATGCTCGCATAATGATACATCAACCACAGACTGGATGTGGGGGTCATGTTGAGGATGTCAGACGCCAAGTGAATGAAGCTGTTCAATCTCGTCATGTTTGTCTTTCTTCCTCTGTCTGAGTTGCACAATTCTAATAATTTGTGGTCAACTTAAATGGTCCTAACTCCTATGATCTTTGATCATGCTGAAAACAGTTTTTTATGGTAACTCATATCGTAGCCCTTATATTTGTGACAATCACATAAGGGTATTTAAGGTGTTGGGTTTTTTCAGTTCATATATTTGCTGCCTCTTGGATTCCCTGTTACTGGAAAACTATATCTTCACATTATACTTGGCTTTTTGGTATTCCTATTTTCAATGCATGTGAAACTAAACTTCAATTGTCATATTTTTTTCATCACATGCCCAAGTTTTTTGGCTTTTTTCCTTGTTGTAGTTCACACTTCTTGGAATGCTATTATGTCCCTCCTCATTCCTTCTCTTTGGATTACAGAAAATTGACAAGATGTACAGTGCTTTTACTGGACAGTCATTAGAGAAGGTACAACAATATACAGAGAGAGACCGATTTCTGTCTGTTTCTGAGGCTTTGGAGTTTGGCCTTATTGATGGTGTCCTGGAAACGGAGTATTGACTTACAGATTATTTGTAGGATATCTTAAAAGAGATTGAAAATGTTAATTCCTTTCAAATGGATATTGTAGAATTTCATTAATTAATGATAATTTGCAAATCTTGAGAATTGTATTTTCTTGTTAGTTCCTCGTAAGTATGCTATTATTAAAAG 1475 0.3973 MVPQALSVPASASFTVASRTRSSSHLLFSHRNPCSLASSLPTPYGHSSEVGLSSKSRGFPLKLDEKNIHGASTSYGAIEAKKGNPPITPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADILVYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQTGCGGHVEDVRRQVNEAVQSRHVCLSSSV 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01889 235 CDD S14_ClpP_2 99 228 IPR001907 GO:0004176|GO:0004252|GO:0006508
Pste1g01889 235 FunFam ATP-dependent Clp protease proteolytic subunit 79 232 - -
Pste1g01889 235 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 74 227 IPR023562 -
Pste1g01889 235 Gene3D - 79 231 - -
Pste1g01889 235 Pfam Clp protease 99 228 IPR023562 -
Pste1g01889 235 SUPERFAMILY ClpP/crotonase 98 228 IPR029045 -
Pste1g01889 235 ProSitePatterns Endopeptidase Clp histidine active site. 192 205 IPR033135 -
Pste1g01889 235 PRINTS Clp protease catalytic subunit P signature 139 159 IPR001907 GO:0004176|GO:0004252|GO:0006508
Pste1g01889 235 PRINTS Clp protease catalytic subunit P signature 170 187 IPR001907 GO:0004176|GO:0004252|GO:0006508
Pste1g01889 235 PRINTS Clp protease catalytic subunit P signature 191 210 IPR001907 GO:0004176|GO:0004252|GO:0006508
Pste1g01889 235 PRINTS Clp protease catalytic subunit P signature 99 114 IPR001907 GO:0004176|GO:0004252|GO:0006508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01889 1 5843219 5847655 Pste1g01889 1 5843219 5847655 ECH