Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01864 AGCCAATGTTGAAAATGCCAGGGCCTACAATGGGAAACCTCATTGCACACCTTAGATAATTGGTTGGCACTCCTTTGATGCCTGGCAAATCTGTAGACACCTTCATTTTTGCACTCTATGATGAGGATTTGAAACCTGGTCCAGCATCTGAACGAGCATTTGGCTGTTCAAAACTGATCTTACCATGGCATATGATGTTGGCCTATTCAAGTCTAGCTCTAACACCCATAAGAATCCACCAAGTACAAGTAGTCCAGCTCCAACACAATGGAGGTGCTTGTTATGAACCTAACACAGTATCATCTCATGCTGCCTTTGCCATGAATCTCTACTACCACAAGTTCGGCACAAATCCCTGGAACCGTGATTTCTCTAAAACAGCAATGCTTACACCCCAAATCCAATTAGTTAACTTGATTTTCCTTTTCAACGTAGGTTACAATGCTTGCATTTATCCTGGTGGGAGTACCTGA 473 0.4292 MPGKSVDTFIFALYDEDLKPGPASERAFGCSKLILPWHMMLAYSSLALTPIRIHQVQVVQLQHNGGACYEPNTVSSHAAFAMNLYYHKFGTNPWNRDFSKTAMLTPQIQLVNLIFLFNVGYNACIYPGGST 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01864 131 SMART X8_cls 55 126 IPR012946 -
Pste1g01864 131 PANTHER BETA-1,3 GLUCANASE 63 107 IPR044788 -
Pste1g01864 131 Gene3D Glycosidases 1 33 - -
Pste1g01864 131 Pfam X8 domain 60 103 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01864 Pste-Chr1 5756066 5756815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01864 1 127 Glycoside Hydrolase AT4G34480 41.667 5.54e-27 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01864 1 5756066 5756815 Pste1g01864 1 5756066 5756815 ECH