Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01826 CGTTGTTACTATGGAGCAAGAGAAGCCATTGGTGGGTCCATGTTTTGCATCTGAAAGCAACCCCATAACCATAACCCCCGAATCTGAAACGGTCACCACTTTCACCCCCATTTTCTGTGAATCCAATGCTGAATGCCCATTGTTAAAAGATAGTTCTTTTGCGTTATTGAGTGAGCATAGCTTCACAAGAGTGCGGTTTGAGTGCCAAAACCTTTCTCTGTATTCTGGGGCTAATGCATATCATCGAAAGTCAGTTGCTGCAAGTTTGGTCCAAGGTGTTTATATTCTAGAGAAGGACAGGCAAGAAGGGCGTGAAGGTACCAATGCTCTTGCACTCCCTTGGTGGTCATTCTTCCACTTTCAGCTTCTCCATACGCTTGTTGATGATGTTGACTCTTCTATATTTGGTGCAATTTATGAGTTCAAGCCTCCATCATCTATGTGCAATGACACCTTACATAGAAGTCCCCGTTATGTAATCGCCTTTCGAGGAACTATAACCAAGGAAGACTCAGTTTTCCGTGACATTGAGTTGGATATCCACTTAGTGAGAAATGGGCTTCATCAAACTTCACGTGGTGAGATAGCTATCCAAGCTGTGCGAAACATGGTGTCTTCTGTGGGTGGTTCCAATATCTGGTTAGCTGGTCACTCACTAGGATCAGCAATGGCAATGCTCGCTGGGAAAACCATGGCCAAGGCTGGCATATTTATTGAGTCTTTTCTCTTCAATCCTCCATATGTGTCTGCTCCAATTGAGAGAATCAAGGATAAGAAATTGAAACATGGGCTTCGATTTGCTGGCAGTGTAGTAACAGCTGGACTTGCTATTGCTATGAAGGCTAAGCAGAAGAAGAGTTTGTCCTCTGACCCATTTGTTGCTTTTTCTGCTTGGATTCCATGCTTATTTGTGAATCTATCTGACCATATCTGCTCTGAGTATATTGGGTACTTTGAGCACAGAAGAAAAATGGAGGAGATTGGTGCAGGAAGCATTGAGAAGTTGGCGACTCAAACCTCCCTTGGTTGTCTACTGATGGGTGCCTTGGGGAAGGAATCTAATGAACCCCTCCACCTCATTCCTTCGGCTTCTCTAACAATTAATGATACTCCTTCACGAGATTTCAGAGAAGCTCATGGGATTCACCAGTGGTGGAAACCAGACTTACGTCTAGAATCCAAGCTCTACCAATACTAGTTAGTTACTCTTTTAGTTGTTTTTAGTGTGTTTGGAATGGCAGCAAGCATGGTGAGGTTGAATGGTTAATTTTTGAGTGCATAGTAAATATAAAACAAGTTTTATAATAACTTTCG 1314 0.4285 MEQEKPLVGPCFASESNPITITPESETVTTFTPIFCESNAECPLLKDSSFALLSEHSFTRVRFECQNLSLYSGANAYHRKSVAASLVQGVYILEKDRQEGREGTNALALPWWSFFHFQLLHTLVDDVDSSIFGAIYEFKPPSSMCNDTLHRSPRYVIAFRGTITKEDSVFRDIELDIHLVRNGLHQTSRGEIAIQAVRNMVSSVGGSNIWLAGHSLGSAMAMLAGKTMAKAGIFIESFLFNPPYVSAPIERIKDKKLKHGLRFAGSVVTAGLAIAMKAKQKKSLSSDPFVAFSAWIPCLFVNLSDHICSEYIGYFEHRRKMEEIGAGSIEKLATQTSLGCLLMGALGKESNEPLHLIPSASLTINDTPSRDFREAHGIHQWWKPDLRLESKLYQY 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01826 395 Pfam Lipase (class 3) 190 232 IPR002921 GO:0006629
Pste1g01826 395 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 72 394 - -
Pste1g01826 395 SUPERFAMILY alpha/beta-Hydrolases 110 248 IPR029058 -
Pste1g01826 395 Gene3D alpha/beta hydrolase 87 258 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01826 Pste-Chr1 5606582 5609084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01826 67 328 Acyl Lipid Metabolism Gene Families AT2G05260 57.509 6.22e-108 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01826 1 5606582 5609084 Pste1g01826 1 5606582 5609084 ECH
Pste1g01826 1 5606582 5609084 Pste3g00804 3 4972494 4974435 PCT