Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01589 TAGTCGCAAGAACACAGATCAACAGGCAGTCATCGTAGACAGTGGAAATTGTTTCAGTAAATTGGAAAATCAGTCATGCACGTGATACTTGCTACCTTCTCTTCAAGTTTCAACACTCACGTACCTACATATATAAATGCTATCTCCCCAAAACCATTTCAAACCACACCATCCCTCTTCTACTAGTAAAAGTACTGTGACTTAGTTTTGAGTTCCATCGATCACATCACTTTGAAGGAAGTTCATATATTAAGATGGTGAGCGTAGCTGACATCTGCAAGGCACAGAGAGCAGAAGGCCCAGCAACCGTCCTTGCCATTGGCACTGCAAACCCACCAAACTGTGTGGATCAGAGCACCTATCCTGATTACTACTTCAGAATCACAAACAGTGAACACATGACTGATCTCAAAAGGAAATTCAAGCGCATGTGTGACAAGTCGATGATCAAGAAGAGATATATGTACTTAACAGAAGAGATCTTGAAAGAGAATCCTAACCTCTGCGCTTACATGGGAACTTCATTGGATGCTAGGCAAAACATGGTAGTGGTAGAGGTACCAAAACTAGGGAAAGAAGCCGCAGCAAAGGCCGTAAAAAGGTGCTCTGCTGGTGGCATGGTGCTTCGTATGGCTAAGGATTTGGCTGAGAACAACAAAGGTGCACGTGTGTTAGTTGTTTGCTCTGAGATCACTGCAATCACATTTCATGGCCCAACTGAAACTCACCTAGATAGTCTTGTGGGCCAAGCATTGTTTGGAGATGGAGTAGCTGCGTTCATTGTTGGTTCTGACCCAATTCCACAAATTGAGAAGCCTTTATATGAGCTGGTTTGGACTTCACAGACAATTGCTCCTAATAGTGAAGGGGCTATTGATGGCCACCTTCGTGAAATTGGCCTCACATTTCACCTCCTTAAGGATGTTCCCGGGATTGTCTCCAAGAACATTGATAAAACACTTTTTGAGGTCTTCAACCCATTGAATATCTCTGATTACAACTCCATCTTTTGGATTGTTCACCCTGGTGGGCCTGCAATTCTTGACCAAGTTGAACAAAAATTGGGTCTCAAACCTGAAAAGATGAAAGTTACTAGGGAAGTTCTTAGTGAATATGGTAACATGTTAAGTGCATGTGTGTTATTCATCTTGGATGAGATGAGGAGGAAATCAGCTCAAGGCGGACTTAAAACCACAGGTGAAGGACTTGAATGGGGTGTGTTATTTGGTTTTGGACCAGGACTTACTATCGAAGTTGTTGTTTTACATAGCATGGTCATCTAA 1283 0.4263 MVSVADICKAQRAEGPATVLAIGTANPPNCVDQSTYPDYYFRITNSEHMTDLKRKFKRMCDKSMIKKRYMYLTEEILKENPNLCAYMGTSLDARQNMVVVEVPKLGKEAAAKAVKRCSAGGMVLRMAKDLAENNKGARVLVVCSEITAITFHGPTETHLDSLVGQALFGDGVAAFIVGSDPIPQIEKPLYELVWTSQTIAPNSEGAIDGHLREIGLTFHLLKDVPGIVSKNIDKTLFEVFNPLNISDYNSIFWIVHPGGPAILDQVEQKLGLKPEKMKVTREVLSEYGNMLSACVLFILDEMRRKSAQGGLKTTGEGLEWGVLFGFGPGLTIEVVVLHSMVI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01589 342 FunFam Chalcone synthase 1 189 341 - -
Pste1g01589 342 SUPERFAMILY Thiolase-like 188 339 IPR016039 GO:0016746
Pste1g01589 342 Gene3D - 116 188 IPR016039 GO:0016746
Pste1g01589 342 CDD CHS_like 16 337 - -
Pste1g01589 342 Gene3D - 1 115 IPR016039 GO:0016746
Pste1g01589 342 Pfam Chalcone and stilbene synthases, C-terminal domain 191 340 IPR012328 -
Pste1g01589 342 Pfam Chalcone and stilbene synthases, N-terminal domain 7 115 IPR001099 -
Pste1g01589 342 Pfam Chalcone and stilbene synthases, N-terminal domain 116 181 IPR001099 -
Pste1g01589 342 PIRSF PKS_III 116 341 IPR011141 GO:0009058|GO:0016747
Pste1g01589 342 PIRSF PKS_III 2 116 IPR011141 GO:0009058|GO:0016747
Pste1g01589 342 Gene3D - 189 342 IPR016039 GO:0016746
Pste1g01589 342 SUPERFAMILY Thiolase-like 1 186 IPR016039 GO:0016746
Pste1g01589 342 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 116 340 IPR011141 GO:0009058|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01589 Pste-Chr1 4924882 4926643 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01589 70 327 Miscellaneous Gene Families AT4G34520 24.497 2.19e-10 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01589 1 4924882 4926643 Pste1g01589 1 4924882 4926643 ECH