Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01581 ATGACCGAGCTCAAAGACAAATTCCAGCGCATGTGCGACAAGTCTATGATAAAGAAGAGATACATGTACTTAACAGAAGAGATATTGAAGGAGAACCCGAACCTATGTGCTTACATGGCACCTTCATTGGATGCTAGGCAAGACATGGTGGTGGTAGAGGTACCAAGACTAGGGAAAGAGGCAGCAACAAAGGCCATAAAAGAGTGGGGTCAAGCAAAGTCAAAGATTACCCACTTGATCTTTTGCACCACAAGTGGTGTCGACATGCCTGGTGCTGATTACCAACTCACAAAACTCTTGGGACTTAGACCCTCTGTGAAGAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTTTGGCCAAAGATTTGGCTGAGAACAACAAGGGTGCACGTGTGCTGGTTGTTTGTTCTGAGATCACTGCAGTCACATTCCGTGGCCCAACTGACACTCACCTAGATAGTCTTGTGGGCCAAGCATTGTTTGGAGATGGGGCAGCTGCGGTCATTGTTGGTTCTGACCCAATTCCACAAATTGAGAAGCCTTTGTATGAGCTGGTTTGGACTGCACAGACTATTGCTCCTGATAGTGAAGGGGCTATTGATGGTCATCTTCGTGAAGCTGGCCTCACATTTCACCTTCTTAAGGATGTTCCCGGTATTGTCTCTAAGAACATTGATAAAGCACTTTTTGAGGCCTTCAACCCATTGAACATCTCTGATTACAACTCCATCTTTTGGATTGCTCACCCTGGTGGCCCTGCTATTCTTGACCAAGTTGAGCAAAAATTGGCTCTCAAACCTGAAAAGATGAAGGCCACCAGGGAAGTGCTTAGTCAATATGGTAACATGTCTAGTGCATGTGTGCTCTTCATCTTGGATGAGATGAGGAGGAAATCTGCTCAAGATGGACTTCAAACCACAGGTGAAGGCCTTGAATGGGGTGTCTTATTCGGTTTTGGACCAGGTCTTACTATTGAAACTTGTCCCCAAGTCTTTTGTTCTCCCTCTGTTTTCGATTCTCTCTCCTCATCGTTCGCCATTTGGTCTTATTATCTGCTCCGCTACTACTCAAGTCGCCGCACTGTCGTCCTCACATCTCGCACTGTCGAGGTCTCGCAACATCGTGCTCGCGTCTTGCATTGTCGCGCTCTCTTCATGCACCGTCGCGCTCATATCTCACACCACGCTTGCGTTTCCACCCCAGTCGGCGCTCTCGCTTGA 1239 0.4778 MTELKDKFQRMCDKSMIKKRYMYLTEEILKENPNLCAYMAPSLDARQDMVVVEVPRLGKEAATKAIKEWGQAKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLYELVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSQYGNMSSACVLFILDEMRRKSAQDGLQTTGEGLEWGVLFGFGPGLTIETCPQVFCSPSVFDSLSSSFAIWSYYLLRYYSSRRTVVLTSRTVEVSQHRARVLHCRALFMHRRAHISHHACVSTPVGALA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01581 412 FunFam Chalcone synthase 2 1 187 - -
Pste1g01581 412 Gene3D - 188 337 IPR016039 GO:0016746
Pste1g01581 412 Gene3D - 1 187 IPR016039 GO:0016746
Pste1g01581 412 SUPERFAMILY Thiolase-like 187 334 IPR016039 GO:0016746
Pste1g01581 412 Pfam Chalcone and stilbene synthases, N-terminal domain 1 180 IPR001099 -
Pste1g01581 412 SUPERFAMILY Thiolase-like 2 185 IPR016039 GO:0016746
Pste1g01581 412 FunFam Chalcone synthase 1 188 337 - -
Pste1g01581 412 Pfam Chalcone and stilbene synthases, C-terminal domain 190 333 IPR012328 -
Pste1g01581 412 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 1 334 IPR011141 GO:0009058|GO:0016747
Pste1g01581 412 PIRSF PKS_III 1 336 IPR011141 GO:0009058|GO:0016747
Pste1g01581 412 ProSitePatterns Chalcone and stilbene synthases active site. 108 124 IPR018088 GO:0009058|GO:0016746
Pste1g01581 412 CDD CHS_like 1 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01581 Pste-Chr1 4906132 4908886 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01581 102 326 Miscellaneous Gene Families AT3G52160 28.947 1.69e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01581 1 4906132 4908886 Pste1g01581 1 4906132 4908886 ECH