Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01560 AGAAACATATGCATGCCACCAATTAGTCTTATAGGTCAAAGACCAGCAAGCAGTCATAGTAGACGGGGAAATAAATTGGTAATTAATGCACCTTCTCTCTTGTGTTCTGCACCAGTATTGTATTGTGTTGAGTTTCATCACTTCATTCAGTCACATAGCAAGACCAAGATGGTGAGCGTAGCTGAGATCCGCAAGGCACAGAGGGCAGAAGGCCCCGCAACCATCCTTGCCATTGGCACTGCAAACCCACCAAACTGTGTTGATCAGAGCACCTATCCTGATTACTACTTCAGAATCACAAACAGTGAACACATGACTGAGCTCAAAGACAAATTCCAGCGCATGTGTAAGTCCTATATAATACTCTCATCATCTATAACTAATATACCAATACTTAGTTATTATATGTATTCATCCTACAATATACATATATATTCAATTCAATTGATGTGCTCACTAAATCAATTAATATTAATGCAAAGCGACAAGTCTATGATAAAGAAGAGATACATGTACTTAAGAAGAGATATTGAAGGAGAACCCGAACCTATGCAAGACATGGTGGTGGTAGAGGTACCAAGACTAGGGAAAGAGGCAGCAACAAAGGCCATAAAAGAGTGGGGTCAAGCAAAGTCAAAGATTACCCACTTGATCTTTGCACCACAAGTGACCCTCTGTGAAGAGGTACATGATGTACCAACAAGGGTGCTTTGCGGTGTACTTGCTTGTTTGGCCAAAGATTTGGTGAGAACAACAAGGGTGCACGTGTCTTTGGTTGTTTGTTCCGAGATCACTGCAGATCACATTCCGTGGCCCAACCGACACTCACCTAGATATGCGGTCATTGTTGGTTCGACCCAATTCCACAAATTGAGAAGCCTTTGTATGAGCTGGTTTGACCGCATGACTATTGCTCCGATAGTGAAGGGGCTATTGATGGCCACCTTCTGGCCTGCTATTCTCGACCAAGTTGAGCAAAAATTGGCTCTCAAACCTGAAAAGATGAAGGCCACTAGGGAAGTTCTTAGTCAATATGGTAACATGTCTAGTGCATGTGTGCTCTTCATCTTGGATGAGATGAGGAGGAAATCGCTCAGGATGGACTTGGACCACTGTGAAGGCCTTGAATGGGTGTCTTATTTGGTTTTGGGCAGTCTTACTATTGAAACTGTTGTCTGCAGTGTGCCTATCTAG 1194 0.4296 RNICMPPISLIGQRPASSHSRRGNKLVINAPSLLCSAPVLYCVEFHHFIQSHSKTKMVSVAEIRKAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKDKFQRMCKSYIILSSSITNIPILSYYMYSSYNIHIYSIQLMCSLNQLILMQSDKSMIKKRYMYLRRDIEGEPEPMQDMVVVEVPRLGKEAATKAIKEWGQAKSKITHLIFAPQVTLCEEVHDVPTRVLCGVLACLAKDLVRTTRVHVSLVVCSEITADHIPWPNRHSPRYAVIVGSTQFHKLRSLCMSWFDRMTIAPIVKGLLMATFWPAILDQVEQKLALKPEKMKATREVLSQYGNMSSACVLFILDEMRRKSLRMDLDHCEGLEWVSYLVLGSLTIETVVCSVPI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01560 397 SUPERFAMILY Thiolase-like 71 276 IPR016039 GO:0016746
Pste1g01560 397 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 318 393 IPR011141 GO:0009058|GO:0016747
Pste1g01560 397 Pfam Chalcone and stilbene synthases, N-terminal domain 62 121 IPR001099 -
Pste1g01560 397 Pfam Chalcone and stilbene synthases, N-terminal domain 155 220 IPR001099 -
Pste1g01560 397 Pfam Chalcone and stilbene synthases, C-terminal domain 318 393 IPR012328 -
Pste1g01560 397 Gene3D - 45 233 IPR016039 GO:0016746
Pste1g01560 397 SUPERFAMILY Thiolase-like 318 366 IPR016039 GO:0016746
Pste1g01560 397 Gene3D - 317 397 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01560 Pste-Chr1 4850921 4852465 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01560 1 4850921 4852465 Pste1g01560 1 4850921 4852465 ECH