Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01546 TATGCATGCCACCTTACCAAACCCTTAGTTTTAGGTCAAACACCAGCAAGCAGTCACAGTTGACGGGAAAATAAATTGGTAATTAATGCACGTGAAACTCACCTACCCTCCCATCAACCCTCACATATATATAAACATTATGCCCCCAAACAAGTTGAAAAACCACACCTTCCATTTCAGCTTCTCTCTTCTGTTCTACACCAATACTGTGACTTAACTTAATTCGGTTAGATAGCAAGACCAAGATGGTGAGCGTAGCTGAGATCCGCAAGGCACAGAGGGCAGAAGGCCCCGCAACCATCCTTGCCATTGGCACTGCAAACCCACCAAACTGTGTTGATCAGAGCACCTATCCTGATTACTACTTCAGAATCACAAACAGTGAACACATGACCGAGCTCAAAGACAAATTCCAGCGCATGCGACAAGTCTATGATAAAGAAGAGATACATGTACTTAATGAAGAGATATTGAAGGAGAACCCGAACCTATGTGCTTACATGGCACCTTCATTGGATGCTAGGCAAGACATGGTGGTGGTAGAGGTACCAAGACTAGGGAAAGAGGCAGCAACAAAGGCCATAAAAGAGGGGTCAAGCAAAGTCAAAGATTACCCACTTGATCTTTGCACCACAAGTGGTGTCGACATGCACTGTGCTGATTACCAACTCACAAAACTCTTGGGACTTAGACCCTCTGTGAAGAGGTACATGATGTACCAACAAGGGTGCTTTGCGGTGTACGGTGCTTCGTTTGGCCAAGGATTTGGTGAGAACAACAAGGGTGCACGTGTCTTTGGTTGTTTGTTCGAGATCACTGCAATCACATTCCGTGGCCCAACCGACACTCACCTAGATAGTCTTGTGGGCCAAGCATTGTTTGGAGATGGGGCATTGCGGGCTATTGATGGTCATCTTCGTGAAGCTGGCCTCACATTTCACCTCCTTAAGGATGTTCCCGGTATTGTCTCTAAGAACATTGATAAAGCACTTTTTGAGGCCTTCAACCCATTGAACATCTCTGATTACAACTCCATCTTTTGGATTGCTCACCCTGGTGGCCCTGCTATTCTCGACCAAGTTGAGCAAAAATTGGCTCTCAAACCTGAAAAGATGAAGGCCACTAGGAATGCATGTGTGCTCTTCATCTTGGATGAGATGAGGAGGAAATCTGCTGAGGATAGACTTCAAACCACAGGTGAAGGCCTTGAATGGGGTGTCTTATTTGGTTTTGGACCAGGTCTTACTATTGAAACTGTTGTCCTACGCAGTGTGCCTATC 1280 0.457 MVSVAEIRKAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKDKFQRMRQVYDKEEIHVLNEEILKENPNLCAYMAPSLDARQDMVVVEVPRLGKEAATKAIKEGSSKVKDYPLDLCTTSGVDMHCADYQLTKLLGLRPSVKRYMMYQQGCFAVYGASFGQGFGENNKGARVFGCLFEITAITFRGPTDTHLDSLVGQALFGDGALRAIDGHLREAGLTFHLLKDVPGIVSKNIDKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATRNACVLFILDEMRRKSAEDRLQTTGEGLEWGVLFGFGPGLTIETVVLRSVPI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01546 345 SUPERFAMILY Thiolase-like 1 216 IPR016039 GO:0016746
Pste1g01546 345 Gene3D - 1 219 IPR016039 GO:0016746
Pste1g01546 345 SUPERFAMILY Thiolase-like 213 343 IPR016039 GO:0016746
Pste1g01546 345 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 5 218 IPR011141 GO:0009058|GO:0016747
Pste1g01546 345 PIRSF PKS_III 216 345 IPR011141 GO:0009058|GO:0016747
Pste1g01546 345 PIRSF PKS_III 2 220 IPR011141 GO:0009058|GO:0016747
Pste1g01546 345 Gene3D - 220 343 IPR016039 GO:0016746
Pste1g01546 345 FunFam Chalcone synthase 2 1 224 - -
Pste1g01546 345 Pfam Chalcone and stilbene synthases, N-terminal domain 6 221 IPR001099 -
Pste1g01546 345 CDD CHS_like 16 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01546 Pste-Chr1 4818394 4819925 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01546 1 4818394 4819925 Pste1g01546 1 4818394 4819925 ECH