Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01530 AGAAACATATGCATGCCACCAATTAGTCTTATAGGTCAAAGACCAGCAAGCAGTCATAGTAGACGGGGAAATAAATTGGTAATTAATGCACCTTCTCTCTTGTGTTCTGCACCAGTATTGTATTGTGTTGAGTTTCATCACTTCATTCAGTCACATAGCAAGACCAAGATGGTGAGCGTAGCTGAGATCCGCAAGGCACAGAGGGCAGAAGGCCCCGCAACCATCCTTGCCATTGGCACTGCAAACCCACCAAACTGTGTTGATCAGAGCACCTATCCTGATTACTACTTCAGAATCACAAACAGTGAACACATGACCGAGCTCAAAGACAAATTCCAGCGCATGCGACAAGTCTATGATAAAGAAGAGATACATGTACTTAATGAGAACCCGAACCTATGTGCTTACATGGCACCTTCATTGGATGCTAGGCAAGACATGGTGGTGGTAGAGGAAAGAGGCAGCAACAAAGGCCATAAAAGAGTGGGGTCAAGCAAAGTCAAAGATTACCCACTTGATCTTTTGCACCACAAGTGGTGTCGACATGCCAGTGCTGATTACCAACTCACAAAACTCTTGGGACTTAGACCTCGTGAAGAGGTACATGATGTACCAACAAGGGTGCTTTGCGGTGGCACGGTGCTTCGTTTGGCCAAAGATTTGGTGAGAACAACAAGGGTGCACGTGTCTTTGGTTGTTTATCACTGCGATCACATTCGTGGCCCAACCGACACTCACCTAGATAGTCTTGTGGGCCAAGCATTGTTTGGAGATGGGGCAGCTGCGGTCATTGTTGGTTCTGACCCAATTCCACAAATTGAGAAGCCTTTGTATGAGCTGGTTTGGACTGCACAGACTATTGCTCCTGATAGTGAAGGGGCTATTGATGGCCACCTTCGTGAAGCTGGCCTCACATTTCACCTCCTTAAGGATGTTCCCGGTATTGTCTCTAAGAACATTGATAAAGCACTTTTTGAGGCCTTCAACCCATTGAACATCTCTGATTACAACTCCATCTTTTGGATTGCTCACCCTGGTGGCCCTGCTATTCTCGACCAAGTTGAGCAAAAATTGGCTCTCAAACCTGAAAAGATGAAGGCCACTAGGGAAGTTCTTAGTCAATATGGTAACATGTCTAGTGCATATGAGGAGGAAATCTCGAGGATAGACTTGGACCACTGTGAAGGCCTTGAATGGGGTGTCTTATTTGGTTTTGGGCCAGGTCTTACTATTGAAACTGTTGTCCTGCGCAGTGTGCCTATCTAG 1266 0.4613 RNICMPPISLIGQRPASSHSRRGNKLVINAPSLLCSAPVLYCVEFHHFIQSHSKTKMVSVAEIRKAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKDKFQRMRQVYDKEEIHVLNENPNLCAYMAPSLDARQDMVVVEERGSNKGHKRVGSSKVKDYPLDLLHHKWCRHASADYQLTKLLGLRPREEVHDVPTRVLCGGTVLRLAKDLVRTTRVHVSLVVYHCDHIRGPTDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLYELVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSQYGNMSSAYEEEISRIDLDHCEGLEWGVLFGFGPGLTIETVVLRSVPI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01530 421 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 60 419 IPR011141 GO:0009058|GO:0016747
Pste1g01530 421 FunFam Chalcone synthase 1 277 420 - -
Pste1g01530 421 PIRSF PKS_III 58 421 IPR011141 GO:0009058|GO:0016747
Pste1g01530 421 SUPERFAMILY Thiolase-like 67 272 IPR016039 GO:0016746
Pste1g01530 421 Gene3D - 45 155 IPR016039 GO:0016746
Pste1g01530 421 Gene3D - 179 276 IPR016039 GO:0016746
Pste1g01530 421 Pfam Chalcone and stilbene synthases, N-terminal domain 62 269 IPR001099 -
Pste1g01530 421 CDD CHS_like 72 416 - -
Pste1g01530 421 Gene3D - 277 421 IPR016039 GO:0016746
Pste1g01530 421 Pfam Chalcone and stilbene synthases, C-terminal domain 279 420 IPR012328 -
Pste1g01530 421 SUPERFAMILY Thiolase-like 276 419 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01530 Pste-Chr1 4780028 4781586 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01530 1 4780028 4781586 Pste1g01530 1 4780028 4781586 ECH