Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01410 CCTCTTTCTACACTTTCTCTATGTGTCTCACTTTCATCAATCTTTCACTGTCTTCTCTATATTTTTTCTCTTCTTTCCCTTTCCGCACACAACCCTAACCCTAAACACAAAAATTAATTCACAATCACTTCCACCGCTTAAAACCCTAACTCCAGAGATCGCTCCATCTCCTTCTCGATTCCACAAACCCTAATAATGGACTCGCAACAGAGCAATCTATTCGAGACCGCTTCGCAACCCGACAACGCCAACGATGCCTACACTTTCCTCGAATTCAACACGCAGGGCGAGGATTTCGACTATCCTGAGTTTCGCGACCCGATTAGGTCGCCGGTGGCATGGCCCACACCCTCTGATTCGCTGGCGGAACCTTCGGAGCGCGGCGCCGGCGGGGGACCCGGTTCCGATCACCAGTCCGACACCTCACCGGTTTCTGCAGCTCCCGGTAGCGCCACCAAGGGCAGTCGCTCGGGAAGCGGCGGAGGGAACAGCAGCCAGATGGTGGATGCGCTCGCCGCGGGGATGAGCGGGTTGAATTTTGAGGAGACTGGGGATGATGATAACTATGAGTATGGTAAAGGGGATTTCACTGAACACGCTTGCCGCTATTGCGGGGTTTCCAATCCTGCGTGCGTGGTGAGGTGCAATGTGCCTTCGTGTCGAAAGTGGTTCTGTAATTCTCGGGGGAACACTTCCGGATCGCATATTGTCAATCACCTGGTTCGGGCTAAACACAAGGAAGTTTGCCTACACAAAGATAGTCCATTGGGAGAAACGATTCTTGAATGCTACAATTGTGGATGCCGTAATGTGTTTCTCCTTGGGTTTATTTCTGCAAAGACGGAAAGTGTGGTTGTCCTTCTTTGTCGTGAACCTTGCTTGAGTGTTAATGCCTTGAAGGATATGAATTGGGACCTTAGTCAATGGTGCCCCTTGATTGATGATAGATGTTTCCTTCAGTGGCTTGTCAAGATTCCATCTGAACAGGAGCAGTTAAGAGCTCGGCAAATAAGTGCACAGCAAATAAATAAGGTGGAAGAGTTGTGGAAGACAAATCCTGATGCATCCTTTGAGGACCTTGAGAAGCCTGGTGTTGATGATGAACCTCAGTCTGTGGCTTTGAAATATGAAGATGCATATCAGTATCAAAATGTATTTGCTCCTCTTATTAAGCTCGAAGCTGATTATGATAAGATGATGAAAGAATCACAAAGCAAGGACAATGTCACTATTCGATGGGATATTGGTCTTAATAAGAAGCGTGTTGCATACTTTGTATTTCCAAAGGAAGATAATGAGTTGCGGCTTGTACCTGGGGATGAATTACGATTGCGTTATTCTGGTGATGCTGCTCATCCTGCGTGGCAATCAGTGGGTCATGTGATTAAGCTAACTGCACAAGAGGAGGTTGCACTGGAGCTTCGTGCTAGTCAGGGGGTTCCAGTTGATGTTAACCATGGTTTCAGTGTTGATTTTGTCTGGAAAAGTACAAGCTTTGATAGGATGCAGGGAGCTATGAAAACCTTTGCTGTGGATGAGACAAGTGTTAGTGGGTATATTTATCATCACTTATTGGGTCATGAAGTGGAGGTTCAAATGGTGCGTAATGCTCTGCCTCGTCGCTTTGGTGCACCTGGGCTTCCTGAGCTGAATGCATCTCAGGTTTTTGCTGTCAAGAGTGTTCTCCAGAGGCCTATTAGTTTGATTCAAGGACCGCCTGGAACTGGTAAGACAGTAACTTCTGCAGCACTTGTGTATCACATGGCCAAGCAATGTCAGGGACAGGTTTTGGTCTGTGCACCCAGTAATGTAGCAGTGGATCAGCTAGCTGAAAAGATAAGTGCTACTGGATTAAAGGTTGTGAGGCTTTGTGCAAAGTCAAGGGAAGCTGTGAGTTCTCCTGTTGAGCATTTAACTCTCCACTATCAGGTTCGACATCTTGACACATCTGACAAGAGTGAACTTCATAAGTTACAACAGCTGAAGGATGAGCAAGGTGAACTTTCCAGCAGTGATGAGAAAAAGTACAAAGCACTTAAGCGAGCAACAGAAAGGGAGATTTCTCAGAGTGCTGATGTGATCTGCTGTACATGTGTTGGTGCAGGAGATCCTCGGCTAGCAAATTTTAGGTTCCGTCAGGTTCTTATTGACGAGTCTACTCAAGCAACTGAACCTGAGTGCCTCATACCTTTGGTTCTTGGAGCAAAGCAGGTTGTTCTTGTTGGTGATCATTGTCAGCTTGGTCCAGTTATTATGTGCAAGAAAGCAGCTCGTGCTGGGTTAGCACAGTCGCTTTTTGAGCGACTTGTTCTACTTGGTGTCAAACCAATTAGATTGCAGGTTCAGTACCGTATGCATCCATGCCTTTCGGAATTTCCCTCAAACAGCTTTTATGAAGGCACCCTACAAAATGGAGTCACTGTTAATGAAAGGCAATCTTCAGGAATTGATTTTCCATGGCCAGTGCCAAACCGTCCCATGTTTTTCTATGTTCAGATGGGACAAGAAGAGATAAGTGCTAGCGGAACCTCTTATTTAAATAGGACTGAGGCAGCAAATGTTGAAAAGATTGTAACTACCTTCCTAAAAAGTGGTGTGGTTCCAAGTCAGATTGGTGTGATAACACCTTATGAGGGGCAAAGAGCTTATATTGTGAACTATATGTCAAGAAATGGTGCTCTTAGGCAGCAGCTTTACAAAGAGATTGAGGTTGCTAGTGTTGATTCCTTTCAAGGAAGAGAGAAAGACTACATCATTCTGTCTTGTGTTAGAAGTAATGAACATCAGGGCATTGGATTCCTGAATGATCCTAGGAGGCTCAATGTTGCTCTGACACGAGCAAGATATGGTATAGTTATTTTGGGAAACCCTAAAGTTTTGAGCAAGCAGCCTCTATGGAATAGCTTGTTGACTCACTACAAGGAACATGAGTGCTTAGTTGAAGGGCCTTTAAATAACTTGAAGCAAAGTATGGTTCAGTTCCAGAAACCCAAGAAGATTTACAATGAACGAAGGCTTTTTTATGGGGGTGGACCTGGAATTGCAGCTAATGATAATTTCGGTTCCGTTGGATCTGGAGCTGGCACAAGTTTAGATAGGAGGAGCGGTCGGGGTAGGGGATCATATATTCCTCCTGGCCCACCAAATGGAACTCATAAACCTGGAGTGCATCCTGCTGGATATCCTGTGCCAAGGGTTCCCTTGCCTCCTTTTCATGGTGGTCCCCAATCTCAACCATATGCCATTCCTTCGCGTGGGGCTGTTCATGGACCTGTTGGGGCAGTTCCTCATGTTCCTTCTCCAGGGAGTCGAGGTTTTGGGGCTGGAAGAGGTAATTCAGGTGCTTCGGTTGGCAATCATCTTCCACATCAACAAAGCACCCAACAGCCTACTGGGAATATTGGATCTACATTTAACTTCCCTGCTCTAGAGAATCCTAACAGCCAGCCATCTGTTGGTGGTCCATTATCTCAACCTGGGTTTGCCAACAATATGCCTGTTCAAGGGGCTACCCAGTCATTTCGTGATCAATTTTCTATGCCCGGAATGTCCCAGGACTTCTTGGGTGACGACTTCAAAAGTCAGGGATCTCACGTTCCTTATAATGTCACTGATTTCTCTACACAGGCTTCTCAAAGTGGATATGCTGTCGATTATACTACACAAGGAGCACAAGGTGGATTCCCTGGGAACTTTCTCAACCAAAATTCTCAAGCTGGATATTCTCGTTTTGGTTCTGGAAACGACTTTATGTCTCAGGATTACATGGGCCATGGATCACAAGGCCTTTTCACTCAGGTGGGATTCAATGATCCCTTGCAAGATGATGCTACACAAAGCCATTTTAGTGTGGCAAATGCCAACCCTCTTCAGTCCCAGATGAGTTCTCTTTACTCCCAACCTTTTGCTCACTACAACACACAGCCGCTTAACATGCAGGCTTCCCAACAGCAGCCTCAGGCTCAGAACTCCCAAAATCAGAAAATCCACTATAACGGTTGAAGAATTTTAGGAGCTTAATGTGGCTTTGTTGGGTTATAGTCTTTGCAATCAGCAACTGGGTTTGTGCTTGTCTTTTGTGCTGAAATACGTTTGCATGAGACATCCGAAGGGATTGCCTTGGGATAGCTATACCGAAGGATTGGTATATGTGATTTGAGTTGATGGAATTTTGGGGCATTACGAAGATACAAGCAGGCGCATCCCGAGCTGAAAAATGATAAGATAACCCCCTTTACCTTACTGAAATTTTGTATTGTTTGGGATTAAGGTGAAATTGTTTGAGAAAGCATTACATGGAATGGTTTTGTCGAAAGGGTTTCGATCGTGAAGCAGAAGGGGCGGTTTACCATTTCGGTGAAATACTGAATATAGTAGTAATCCATACGGCACCAGTCATCGCCAATGAAGTTATTGTACAGAAGGCAGGGATGCGGTGAACCCTTTCAGCTCTTCCTGACATGTAATTTAAACTCGAAATTAAAAACACAATGATATGTTGGAAAGTTCTATTATGCAACTGTTGCCACTCAGAATTTTCTGTGGTATATAAAGGTGTGATAATTGTTTTCCATGTAAATTAGTTATCTTATAAGTGGAATATCTGAGTGCTTTCTTTGGTAATTACGCAAAGAGATATCTCAATTCTCTTGGTTGACCTCCAATTGGAGTTGCAAGTGATAATTCTGAATTTAGG 4696 0.448 MDSQQSNLFETASQPDNANDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLAEPSERGAGGGPGSDHQSDTSPVSAAPGSATKGSRSGSGGGNSSQMVDALAAGMSGLNFEETGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGVDDEPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQCQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIAANDNFGSVGSGAGTSLDRRSGRGRGSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFHGGPQSQPYAIPSRGAVHGPVGAVPHVPSPGSRGFGAGRGNSGASVGNHLPHQQSTQQPTGNIGSTFNFPALENPNSQPSVGGPLSQPGFANNMPVQGATQSFRDQFSMPGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQSGYAVDYTTQGAQGGFPGNFLNQNSQAGYSRFGSGNDFMSQDYMGHGSQGLFTQVGFNDPLQDDATQSHFSVANANPLQSQMSSLYSQPFAHYNTQPLNMQASQQQPQAQNSQNQKIHYNG 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01410 1268 Pfam AAA domain 697 892 IPR041679 -
Pste1g01410 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 481 943 IPR027417 -
Pste1g01410 1268 Pfam AAA domain 584 687 IPR041677 GO:0004386
Pste1g01410 1268 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 493 625 IPR014001 -
Pste1g01410 1268 Gene3D - 340 428 - -
Pste1g01410 1268 Gene3D - 448 718 IPR027417 -
Pste1g01410 1268 MobiDBLite consensus disorder prediction 1 102 - -
Pste1g01410 1268 MobiDBLite consensus disorder prediction 1052 1092 - -
Pste1g01410 1268 FunFam Regulator of nonsense transcripts 1 719 930 - -
Pste1g01410 1268 MobiDBLite consensus disorder prediction 70 102 - -
Pste1g01410 1268 Pfam RNA helicase (UPF2 interacting domain) 134 287 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Pste1g01410 1268 Pfam RNA helicase UPF1, 1B domain 339 428 IPR040812 -
Pste1g01410 1268 MobiDBLite consensus disorder prediction 960 995 - -
Pste1g01410 1268 Gene3D - 719 930 IPR027417 -
Pste1g01410 1268 FunFam regulator of nonsense transcripts 1 homolog 340 428 - -
Pste1g01410 1268 MobiDBLite consensus disorder prediction 1247 1268 - -
Pste1g01410 1268 MobiDBLite consensus disorder prediction 1 26 - -
Pste1g01410 1268 CDD ZBD_UPF1-like 135 257 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Pste1g01410 1268 CDD DEXXQc_UPF1 484 719 - -
Pste1g01410 1268 Gene3D - 570 622 - -
Pste1g01410 1268 CDD 1B_UPF1-like 340 427 IPR040812 -
Pste1g01410 1268 MobiDBLite consensus disorder prediction 1007 1092 - -
Pste1g01410 1268 CDD SF1_C_Upf1 720 909 IPR047187 -
Pste1g01410 1268 PANTHER DNA2/NAM7 HELICASE FAMILY 243 1042 IPR045055 -
Pste1g01410 1268 ProSiteProfiles Upf1 cysteine-histidine-rich (CH-rich) domain profile. 128 287 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01410 Pste-Chr1 4468339 4480359 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01410 1 4468339 4480359 Pste1g01410 1 4468339 4480359 ECH