Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01282 AGTGTTAGCGATGTTGAAGCATTATATGAGCTTTTTAAGAGCATTAGCAAGTCTGTCGTTGATGATGGGCTAATAAGCAAGGAAGAATTTCAATTAGCAATTTTCAATAAAAAGGAAAGAGAGAACCTTTTTACAAGTCAGAAGAAAGGAGCGATTGACTTTGGTGACTTCGTTAGAGCACTCAATGTCTTCCACCTAAATGCACCAATGGAAGTCAAGATAGATTTTTCATTCAGACTTTACGATTTAGATAATACAGGATTTATAGAGCGACACGAGGTCAAGCAAATGATAAATGCACTTCTTTATGAAGCTGATATTAAGTTGTCAGAGGAAATGATAGAAACAATTATTAGCAAGACTTTCTTGGATGCTGACTCCAATCAAGATGGAAAAATAGACAAATTTGAGTGGCAAAACTTTGTTTCCAAAAATCCTTCATTGTTACAAGTCGTGACACTACCCTACCTAAGGGACATAACAATGGCTTTTCCAAGTTTTGTATTTCACACAAAGGTGGATGACGAAATTGCTGAA 537 0.3575 SVSDVEALYELFKSISKSVVDDGLISKEEFQLAIFNKKERENLFTSQKKGAIDFGDFVRALNVFHLNAPMEVKIDFSFRLYDLDNTGFIERHEVKQMINALLYEADIKLSEEMIETIISKTFLDADSNQDGKIDKFEWQNFVSKNPSLLQVVTLPYLRDITMAFPSFVFHTKVDDEIAE 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01282 179 ProSitePatterns EF-hand calcium-binding domain. 126 138 IPR018247 -
Pste1g01282 179 PANTHER CALCINEURIN B 1 175 IPR045198 GO:0005509|GO:0019722|GO:0019900
Pste1g01282 179 SMART efh_1 117 145 IPR002048 GO:0005509
Pste1g01282 179 SMART efh_1 73 101 IPR002048 GO:0005509
Pste1g01282 179 FunFam calcineurin B-like protein 3 1 175 - -
Pste1g01282 179 SUPERFAMILY EF-hand 3 168 IPR011992 -
Pste1g01282 179 CDD EFh 73 143 IPR002048 GO:0005509
Pste1g01282 179 Gene3D - 1 176 - -
Pste1g01282 179 Pfam EF-hand domain pair 73 141 IPR002048 GO:0005509
Pste1g01282 179 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Pste1g01282 179 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Pste1g01282 179 ProSiteProfiles EF-hand calcium-binding domain profile. 113 148 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01282 Pste-Chr1 4074815 4077231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01282 1 178 EF-hand Containing Proteins AT4G17615 68.280 2.58e-88 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01282 1 4074815 4077231 Pste1g01282 1 4074815 4077231 ECH