Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01056 CATAAAATAGAAAACATCCACAAATATGTTTGAGTTGAAAATTTTGGAGAGAGAAAAGAAAGAAAGGGGGAAAAAACATGAATAGCACTTGGTTATTGTGTGTATCCCTTTTGGCATTGGGGTGGTGTTAGTTTGTTTGTTTGTTGAATCCAACGTTGTAAGTTTTGCCAGCGTGCGGCTTGGGAGCATTGGGGTGTCGAAAAACTTGAATCAGCGACCCCATGAGACCTCACAGAACATCGATCCACGCCGTCATCACATGGGTGAGGCGACAGCCCCCAAAGGTGAAGGCTTTTCTCGCCGTCGTCTCCGGCATGGCGGCTCTCGTGCTCCTCCGCTTCATCGTCCACGATCATGACAACCTCTTTGTCGCTGCCGAGGCTGTCCACTCCCTCGGAATTTCCGTCCTCATCTATAAGCTCATGAAAGAGAAGACATGTGCTGGGTTATCACTCAAATCCCAGGAATTAACAGCTATCTTTTTAGCTGTTAGGCTGTACTGCAGTTTTGTTATGGAATATGATATACACACCGTCCTTGATTTTGCTACATTCGTAACAACACTGTGGGTTATATATATGATTCGTTTTAAGCTGAAGGCTAGTTACATGGAGGAGAAGGATAACTTTGCAATATACTATGTGGTGGTACCCTGTGCTGTGTTAGCCTTGCTTATTCATCCAACAACTTCTCATCATTTATTAAACAGGATTTCCTGGGCATTCTGTGTCTATCTGGAAGCTGTTTCAGTCCTACCCCAACTGCGGGTCATGCAGAACACCAAAATTGTTGAGCCATTCACAGCTCATTACGTATTTGCACTGGGTGTCGCAAGATTCTTGAGCTGTGCTCATTGGGTTCTTCAGGTGTTAGATAGCCGTGGACATTTGTTGGTGGCTTTGGGGTATGGTTTATGGCCATCAATGGTTCTCATCTCAGAAATTGTCCAGACCTTCATCTTAGCAGATTTCTGTTACTACTATGTTAAAAGTGTCTTCGGCGGACAGCTTGTTCTACGTCTTCCTTCTGGAGTCGTGTGATTGAAGATCTACTTTGACGTGTACTGTCACATTTGATTTTAACTTAATCAGGCATTATGGTTGGTTACCCTTGTTCGAGTACATTTTGTGTTGACACACTTGTTTGGTTCCTTGGGGGAATGTAAAGTTGGGGATGAAAGAAAACTAAATTATTTATGTTTAAGGTACCATTATATATGGCTGGAAGTGCTTTACACATAAGGTCTCTATCTTTTTCCTTGGACTCTTGGAATTTAGTTATTGTTATAAGTATTCCTTGTGATCTAATTCTACGGTGAGTCTTAGATTGAACCCTGCCTACGGAAAAATATGTGGACTGCGGTTTAGATCTATTTGATGCAGTGGAATACTGCGAGTTTATGTATGGTGCCTTGCACAGAACAATCTAATTTGTTGAGTCCAAATATTGTTGTCTTAAATCTTAATGTTGACATGCCTCGATGTGAATACAATAGTGCTCATGCCCAAGGAATCGTT 1517 0.4212 MRPHRTSIHAVITWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTVLDFATFVTTLWVIYMIRFKLKASYMEEKDNFAIYYVVVPCAVLALLIHPTTSHHLLNRISWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01056 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 47 270 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pste1g01056 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pste1g01056 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pste1g01056 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pste1g01056 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pste1g01056 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016020|GO:0046923
Pste1g01056 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01056 Pste-Chr1 3420860 3424086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01056 5 272 Miscellaneous Gene Families AT2G21190 88.433 3.24e-180 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01056 1 3420860 3424086 Pste1g01056 1 3420860 3424086 ECH