Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01047 CTTTAAAAGTTGGCGGTGTGGGAGTCACGAGAGCAGCGAGGAAATCACAAGAGTCACAAGAAAAGGTAGAGAATGGGGAGGAAAAGTGGAGAGGTTCTAGACGGTTCCAATATTATGGAGTTGGTTGGAAATGAGAAAGTTTTCAGCAACTTCGTGGACCATAAGTTTCACGAGTTAGACAGAGACAGAGATGGCAAACTCTCTGTGAAAGAACTTCAACCTGCTGTTGCTGACATAGGCGCTGCTCTTGGCTTGCCTTCTCCCGGCACTACTTCTCGTTCTGATCACATCTATTCCCAGGTGTTGAATGAATTCACACATGGGAAGCAGGAAAAAGTGAGCAAGAGTGAGTTCCAAGAGGTTCTCTCTGACATTCTATTGGGTATGGCTGCTGGACTGAAGCGTGACCCAATTGTGATTCTTCGCATTGATGGGGAAGATCTTCTGGAGTTTGTTAATGGTTCAGGTTATGAAGCTGAAATGGCATCCATATTCTCTCAGATTGAGTCCCCTGACAGATCACTTCATGATCATATAATTCAAGCTCTGGGCAAGCTCACTGTTGAACAAGGAATTCCTCCTACATCAGATTCTTGGGTGTTGAACAACATTGTGGAACCGGTACTGCTGTCTCAGGATGGTTCTGATTTGGACAAGCCAGTTTCTCAAGAGACATTTTTGGAGGAATTTAAGGTAGTGGCATTGGGTGTGGCTAATCGTCTTAAGGAACAACCTGTCATAGTTGCTCACAGTGAGAACACCTTTGATGGAAGTGGTGTTAAGAGACTATTATCCAACAAGTTTGAATTGGACAAGACTTTGAACTCAGCTATAGAGACTTTGCCTAAAGATAGAAATGGAAAGATGTCAAAGGAGTATCTAAGGTTGGCGCTGGACACAGTGGCTCCATCTGCTGGTTTACCTCCAGTTGGTGCAATTGAAGAGATGGATAAGGTTATCGGTGAAGTGTTTAAGATGGTGAATGCAGATGATGCAAAGGTGATCAAAGAAGAGGAGTACAAGAAAATATTAACTGAAATACTGGGGAGCATAATGTTGCAATTGGAGGGAAATCCCATATCAGTTTCTTCAAATTCGGTAGTGCACGAGCCTCTAGACTCATCTTCTACACTTCTGCAGCCACCCTCTAGTGAAACTGCTGCATAGCTGTGTTTAGATATGTCATATACGACGGGTAAAAAAACCGAGAAATATAATAAAATTTTTATATTTACGTAAATTATTATTTGTAGCATAATCTGTGT 1265 0.4229 MGRKSGEVLDGSNIMELVGNEKVFSNFVDHKFHELDRDRDGKLSVKELQPAVADIGAALGLPSPGTTSRSDHIYSQVLNEFTHGKQEKVSKSEFQEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGSGYEAEMASIFSQIESPDRSLHDHIIQALGKLTVEQGIPPTSDSWVLNNIVEPVLLSQDGSDLDKPVSQETFLEEFKVVALGVANRLKEQPVIVAHSENTFDGSGVKRLLSNKFELDKTLNSAIETLPKDRNGKMSKEYLRLALDTVAPSAGLPPVGAIEEMDKVIGEVFKMVNADDAKVIKEEEYKKILTEILGSIMLQLEGNPISVSSNSVVHEPLDSSSTLLQPPSSETAA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01047 364 ProSitePatterns EF-hand calcium-binding domain. 36 48 IPR018247 -
Pste1g01047 364 Pfam EF-hand domain pair 31 97 IPR002048 GO:0005509
Pste1g01047 364 ProSiteProfiles EF-hand calcium-binding domain profile. 23 58 IPR002048 GO:0005509
Pste1g01047 364 SUPERFAMILY EF-hand 31 334 IPR011992 -
Pste1g01047 364 Gene3D - 26 325 - -
Pste1g01047 364 SMART efh_1 295 323 IPR002048 GO:0005509
Pste1g01047 364 SMART efh_1 249 277 IPR002048 GO:0005509
Pste1g01047 364 SMART efh_1 27 55 IPR002048 GO:0005509
Pste1g01047 364 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 119 343 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01047 3 362 EF-hand Containing Proteins AT4G38810 68.320 4.83e-174 487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01047 1 3374186 3377602 Pste1g01047 1 3374186 3377602 ECH