Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01045 ACTGCGCTTACATAACAACGTTCATTCACTCATCGCCACTGCGTTTTTATTTCATTGATCGTCGGAAACGTTATCCATGGCCGGCGGTGGTTTCGCCAGCAGCGGCGGTGGCGGCGGCGATTTCGAGGCCAAAATCACTCCCATAGTTATAATCTCATGTATTATGGCCGCCACCGGAGGGCTTATGTTCGGCTACGACGTCGGCGTTTCAGGTGGTGTGACGGCGATGCCGCCGTTCTTGAAGAAGTTTTTTCCGACGGTGTACAGAAAGACGGTGGAAGAGAAAGGACTGGACAGTAATTACTGCAAATACGACAACCAAGGATTACAACTTTTCACATCGTCTCTGTATCTGGCGGGTTTGACTTCCACGTTCTTTGCTTCTTACACAACTCGTAAGTTGGGAAGAAGATTGACCATGTTGATTGCTGGCTTCTTCTTCATCGCTGGTGTTGTCTTTAATGCTGCTGCTCAAGACCTTGCCATGCTCATCGTTGGTAGAATCTTACTTGGCTGTGGAGTTGGCTTTGCTAACCAGGCAGTGCCAGTGTTCCTTTCGGAGATCGCACCTTCAAGAATACGAGGAGCATTGAATATACTGTTCCAACTCAACGTCACCATTGGCATTCTATTTGCTAACCTTGTCAATTATGGCACCAACAAAATCAAAGGTAGGTGGGGATGGAGGCTATCTCTAGGGTTGGCTGGTATCCCAGCTGTTTTGCTGACCGTGGGAGCTCTGTTGGTGGTGGACACCCCCAACAGTCTCATTGAACGTGGCCGTTTGGAGGAAGGAAAATCTGTGCTTAAGAGGATTCGTGGCACTGACAACATTGAACCTGAGTTTCTGGAGCTTGTTGAGGCAAGTCGTGTGGCTAAAGAGATATTCCAACAATTCACAGGCATCAATGCAATCATGTTTTATGCCCCGGTGCTGTTCAACACCTTGGGATTCGGGAGTGATGCATCCCTCTATTCTGCGGTGATTACTGGGGCTGTTAATGTGCTGTCAACTATTGTGTCCATCTACTCAGTGGACAAAGTGGGGCGTCGCATGCTCTTGCTGGAGGCTGGTGTGCAGATGTTCTTGTCTCAAGTGGTGATAGCCATCTTACTGGGAATAAAGGTGAAGGACGATTCCAATGACCTTTCAAAAGGTTTTGCAGTGCTTGTGGTTATCATGGTCTGCACTTTCGTCTCTTCCTTTGCATGGTCTTGGGGTCCTCTTGGGTGGCTTATCCCCAGTGAGACTTTTCCATTGGAGACTCGTTCCGCTGGGCAGAGTGTGACTGTTTGTGTCAACCTGCTCTTCACCTTTGTCATTGCACAGGCCTTCCTCTCCATGCTGTGCCACTTCAAGTTTGGCATCTTCTTGTTCTTCTCTAGCTGGGTTCTCGTCATGTCTGTCTTTGTGCTTTTCCTGTTACCCGAGACAAAGAACATCCCCATTGAAGAGATGACTGAGAGAGTGTGGAAGCAACATTGGTTCTGGAAGAGGTTTATCGATGATGATTATTCTGCTGATCACAAACCAGCCAATGGATTTGATCCAACCTCCACTTTGTAAATTCCACCCATTCTGTCTTATCAGATCAAATTATGAGTTTTTTAGGCTCTACAATGTGGATTAGTTACACCTAATTAAGCAAGTTATTTTTTCACTTCCCCCACCCCACCAACAGCATTGTAATCATACATTGATTATCCTGTTTTCCTAGAGATATATGATAAAATATATATTTTTTTCCTTTCCTAGTTCTTCTTTAAGGAAAAGCTTGTTCCATATTTCATACTAATTGTTTGTGTTTGGAAGAATATATAATAAACACACGATCATATTGCCCTGC 1847 0.4559 MAGGGFASSGGGGGDFEAKITPIVIISCIMAATGGLMFGYDVGVSGGVTAMPPFLKKFFPTVYRKTVEEKGLDSNYCKYDNQGLQLFTSSLYLAGLTSTFFASYTTRKLGRRLTMLIAGFFFIAGVVFNAAAQDLAMLIVGRILLGCGVGFANQAVPVFLSEIAPSRIRGALNILFQLNVTIGILFANLVNYGTNKIKGRWGWRLSLGLAGIPAVLLTVGALLVVDTPNSLIERGRLEEGKSVLKRIRGTDNIEPEFLELVEASRVAKEIFQQFTGINAIMFYAPVLFNTLGFGSDASLYSAVITGAVNVLSTIVSIYSVDKVGRRMLLLEAGVQMFLSQVVIAILLGIKVKDDSNDLSKGFAVLVVIMVCTFVSSFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKFGIFLFFSSWVLVMSVFVLFLLPETKNIPIEEMTERVWKQHWFWKRFIDDDYSADHKPANGFDPTSTL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01045 496 ProSitePatterns Sugar transport proteins signature 1. 316 333 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste1g01045 496 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 454 IPR020846 GO:0022857
Pste1g01045 496 PRINTS Sugar transporter signature 390 402 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01045 496 PRINTS Sugar transporter signature 367 388 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01045 496 PRINTS Sugar transporter signature 35 45 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01045 496 PRINTS Sugar transporter signature 139 158 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01045 496 PRINTS Sugar transporter signature 272 282 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g01045 496 Pfam Sugar (and other) transporter 28 463 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste1g01045 496 CDD MFS_STP 30 452 IPR044778 GO:0015145|GO:0015749
Pste1g01045 496 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 15 477 IPR045262 GO:0015144
Pste1g01045 496 SUPERFAMILY MFS general substrate transporter 29 463 IPR036259 -
Pste1g01045 496 Gene3D MFS general substrate transporter like domains 16 266 IPR036259 -
Pste1g01045 496 Gene3D MFS general substrate transporter like domains 267 469 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01045 Pste-Chr1 3355853 3362980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01045 1 496 Organic Solute Cotransporters AT5G26340 79.017 0.0 839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01446 7 13258021 13260815 Pste1g01045 1 3355853 3362980 PCT