Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g01037 | ATGGAAGCTGTATTCCTCTCTAAACCAGTTTCTCATTCTCACCTCAAACATAAAGTCTCTCCAAACCCCTTTACCCCACACCAACAATCATTTCTCTCCATCCGCCACAAGCCCACGCGCTTCCTCCGCGTCACCGCCGCACTCCAAAACCAACAAGCAGCTTCCAAAGACGCCGAAGATGAGTCCTACGGCGAAGTCAAAAGCATAATCGGAAGCAGAGCCCTGGACGACGCCACCGGAATGGAGTATCTCATCGAGTGGAAAGACGGCCACGCGCCCTCCTGGCTGCCCGCCGACTTCATAGCCAAAGACGTCGTCGCCGAGTACGAAACTCCGTGGTGGACCGCCGCCAAGAAGGCCGACCACTCCGCGCTGAAGAACCTGATGGAGTCAGCCGACGGCCGTGACGTGGACGCCGTGGACGGCGAGGGGCGCACCGCGCTTCTCTTCGTGGCCGGACTGGGTTCGGAGGAGTGCGTGAGGCTGCTGGCGGAGGCCGGGGCGAAACTGGACCACCGCGACCGTAGTGGCGGACTGGCGGCGTTGCACATGGCGGCGGGGTACGTGAGGCCAGGCGTGGCGAAGGTGCTTTTGGAGCTAGGCGCAGATCCGGAGGTGTCGGACGAGCGCGGAAGGACGGCGCTGGATCTGGCGAGGGAGATTCTGAAGGTGACGCCGAAGGGAAATCCGATGCAGTTCGGGCGCAGAATTGGACTTGAAGGTGTTATTAGGGTTTTGGAAGGGGCAGTGTTTGAGTACGCCGAGGTGCACGAGATTATGGAACGTAGAGGCAAGGGTGACAATTTGGAGTACCTTGTGAAGTGGAAGGACGGCGCTGTTAATGAGTGGGTCAAAGCCAAGTTTGTGGCCGATGATTTGGTTCAAGACTACGAGGCTGGGCTTGAGTACGCCGTTGCCGTTTCCGTTGTTGCTCGCAGGGTCGTTGATGATGGCACCCCCGAGTTTTTGGTTAAATGGGCCGATTTTGATGAGCCCACCTGGGAGCCCCTGGATAATGTGGACCCTGACCTTGTCAACGCCTTCCTTCAATCTAACAATCAAGCCCATCCCCCCAATAGTAACGGACCTGTTGTTGTCGTACCCGATCATCAATAA | 1116 | 0.5771 | MEAVFLSKPVSHSHLKHKVSPNPFTPHQQSFLSIRHKPTRFLRVTAALQNQQAASKDAEDESYGEVKSIIGSRALDDATGMEYLIEWKDGHAPSWLPADFIAKDVVAEYETPWWTAAKKADHSALKNLMESADGRDVDAVDGEGRTALLFVAGLGSEECVRLLAEAGAKLDHRDRSGGLAALHMAAGYVRPGVAKVLLELGADPEVSDERGRTALDLAREILKVTPKGNPMQFGRRIGLEGVIRVLEGAVFEYAEVHEIMERRGKGDNLEYLVKWKDGAVNEWVKAKFVADDLVQDYEAGLEYAVAVSVVARRVVDDGTPEFLVKWADFDEPTWEPLDNVDPDLVNAFLQSNNQAHPPNSNGPVVVVPDHQ | 371 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g01037 | 371 | ProSiteProfiles | Ankyrin repeat profile. | 143 | 175 | IPR002110 | GO:0005515 | |
| Pste1g01037 | 371 | Pfam | Ankyrin repeats (many copies) | 163 | 218 | IPR002110 | GO:0005515 | |
| Pste1g01037 | 371 | PANTHER | MYOTROPHIN | 50 | 238 | - | - | |
| Pste1g01037 | 371 | SUPERFAMILY | Chromo domain-like | 59 | 113 | IPR016197 | - | |
| Pste1g01037 | 371 | ProSiteProfiles | Ankyrin repeat region circular profile. | 143 | 175 | - | - | |
| Pste1g01037 | 371 | Pfam | Chromo (CHRromatin Organisation MOdifier) domain | 308 | 350 | IPR023780 | - | |
| Pste1g01037 | 371 | ProSiteProfiles | Chromo and chromo shadow domain profile. | 303 | 360 | IPR000953 | - | |
| Pste1g01037 | 371 | SUPERFAMILY | Chromo domain-like | 308 | 358 | IPR016197 | - | |
| Pste1g01037 | 371 | SUPERFAMILY | Ankyrin repeat | 109 | 220 | IPR036770 | - | |
| Pste1g01037 | 371 | CDD | CD_CSD | 316 | 350 | - | - | |
| Pste1g01037 | 371 | Gene3D | - | 60 | 107 | - | - | |
| Pste1g01037 | 371 | Gene3D | - | 250 | 299 | - | - | |
| Pste1g01037 | 371 | SMART | ANK_2a | 177 | 206 | IPR002110 | GO:0005515 | |
| Pste1g01037 | 371 | SMART | ANK_2a | 143 | 172 | IPR002110 | GO:0005515 | |
| Pste1g01037 | 371 | SMART | ANK_2a | 108 | 139 | IPR002110 | GO:0005515 | |
| Pste1g01037 | 371 | ProSiteProfiles | Ankyrin repeat profile. | 177 | 209 | IPR002110 | GO:0005515 | |
| Pste1g01037 | 371 | SUPERFAMILY | Chromo domain-like | 252 | 300 | IPR016197 | - | |
| Pste1g01037 | 371 | Gene3D | - | 108 | 249 | IPR036770 | - | |
| Pste1g01037 | 371 | Gene3D | - | 300 | 351 | - | - | |
| Pste1g01037 | 371 | ProSiteProfiles | Ankyrin repeat region circular profile. | 177 | 209 | - | - | |
| Pste1g01037 | 371 | SMART | chromo_7 | 62 | 114 | IPR000953 | - | |
| Pste1g01037 | 371 | SMART | chromo_7 | 252 | 302 | IPR000953 | - | |
| Pste1g01037 | 371 | SMART | chromo_7 | 303 | 353 | IPR000953 | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste1g01037 | 1 | 3332497 | 3333612 | Pste1g01037 | 1 | 3332497 | 3333612 | ECH |