Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00967 CGTCTGCCCTGGTTGCTGACCATGATCAATTAGTTCGTTTGGGTCGTGGGTGTGCGCGTGTCCATCTATCAAATGGCAACTACCTCCTTCCTACTTATCTACCTCCCACACTCTTTCAATGCCACCCAGCCGCCCTTCCTCTATTTATATTTCCATCTCCACGCTCCCCTCTCTCTCTCTCCTAACTCCTAATTCCTAATTCTAAACCCAACACACATTTCTCTCTTCCCACACCCCCATGGCCCCTTCCTTCCACAACTCCACCGTCTGCGTCATGGACGCCTCTGGACAATTCGGCTTCTCCCTCGTCCAAACACTCCTCCAGAGGGGCTACACCGTCCACGCTTCCCTTCAAAATTATGGGGAACAACACTTATTCCATGGGATTTCCTCCGACCCAAACAAGCTCAAGATTTTTCGATCTGACCCTTTTGATTACCATAGCATAATCGATGCACTCCGAGGCTGCTCTGGTTTGTTCTACACATTTGAACCTCCCCATGACCAGCCTAATTATGATGAATACATGGCAGACGTGGAAGTAAGAGCAGCACACAACGTGCTGGAAGCCTGTGGCCAGACAGAAACAATAGACAAAGTAGTTTTCACGTCCTCAGCTACCGCAGTGGTTTGGAGGGAGGATCGCAAGACCATGGAATTCGATCTAGATGAGAGACATTGGAGTGATGTTAATTTCTGTCGCAAATTCAAGTTATGGCATGGGGTGTCAAAGACAATGGCAGAGAAGAGTGCGTGGGCCTTGGCAATGGACAGAGGAGTGAATATGGTGTCCATCAATGCAGCTTTATTGATGACTCATGATCTCTCTATCAAACACCCTTACCTAAGAGGAGCCGCTGAGATGTACGAGGATGGGGTTTTCGTGACCGTTGATTTACCTTTCTTGGTCAACGCCCACATCTGTGTCTACGAGGATGTCTCATCCTACGGTCGCTATTTGTGCTTCAATCACATCATCAACACTCACGACGACGCCGTTCAGCTCGCCCGCAAGTTGACGCCTGGTGCCTCCTCCGTTCCACAAAGTGGCGACTGTGGTAAGAGTTTTATTGAACAGAGAATAAGCAACAAAAAGTTGAACAAACTTATGGTGGACTTCGAGGCTTGACTTCAATCATCATTTTTTTTTTAATCAATCACATTAGCTGTTTTTCTGAGGGAAAGTATTTGTGTGCAGAATGTTAAAAAAAGTTGTTCCTATACCCCATATTATTATTATTATTATTATTGTTAATTATACATTACATATTCATGTATTTTAAAAATCATTTCTTTATTTATTTCAATATTAGATAATGCAAAAATAATTGTCTAATTTCAACTTCGCTTA 1351 0.4419 MAPSFHNSTVCVMDASGQFGFSLVQTLLQRGYTVHASLQNYGEQHLFHGISSDPNKLKIFRSDPFDYHSIIDALRGCSGLFYTFEPPHDQPNYDEYMADVEVRAAHNVLEACGQTETIDKVVFTSSATAVVWREDRKTMEFDLDERHWSDVNFCRKFKLWHGVSKTMAEKSAWALAMDRGVNMVSINAALLMTHDLSIKHPYLRGAAEMYEDGVFVTVDLPFLVNAHICVYEDVSSYGRYLCFNHIINTHDDAVQLARKLTPGASSVPQSGDCGKSFIEQRISNKKLNKLMVDFEA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00967 296 Pfam NAD(P)H-binding 15 130 IPR016040 -
Pste1g00967 296 Gene3D - 2 296 - -
Pste1g00967 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 263 IPR036291 -
Pste1g00967 296 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 287 - -
Pste1g00967 296 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 3 296 - -
Pste1g00967 296 CDD FR_SDR_e 10 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00967 Pste-Chr1 3044574 3047527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00967 1 294 Miscellaneous Gene Families AT5G19440 30.744 1.43e-40 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00967 1 3044574 3047527 Pste1g00967 1 3044574 3047527 ECH