Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00889 GTGTGAAGAGCAGAAGTTGAAAGCAGCGTCAGGTAGAAAAAGGATGAGCAGCAACGCAGGAAAGTTGGTGTGTGTGACTGGTGCTTCTGGTTTCATTGCTTCATGGATCATCAAATTCCTTCTTCAACGCGCTAAACTTGAAAAGGTTGATCACTTGCTTAAATTTGATGGTGCAAAGGAAAGGTTACATCTCTTCAAGGCTGATCTCCTGGAGGAAGGTTCCTTTGACTCTGCTTTTGAGGGCTGTCATGGTGTCTTTCATACTGCTTCACCCGTTCATTTCGTTGTCACTGATCCACAGAGTCAGTTAATTGACCCTGCTATTAAAGGAACTCTTAACGTTGTTAAATCATGTGCAAAATGGCCATCTGTGAAACGAGTTGTTTTAACGTCTTCTGTTGCTGCCGTTTTATATAATGACAAACCTCGTACTCCCGATGTTGTAGTTGATGAGACTTGGTTTTCAGATCCAAACTTCTTAAGGGAAAATGAGAAGTGGTATGCATTTGCAAAGACTTCCGCCGAGGAAGCTGCCAGGATGTTTTTAAATGATTATGACATAAAGTTGATTGTTATTAACCCATCAATGACGATAGGACCTCTCTTGCAACCAGAGATTAACGCAAGTTCTTCTTCCATTTTAAACGTAATCAATGGTTCAAAAACGTTTCCAAATCATAGCTTTGGATGGATCAACGTGAAAGATGTGGCAAACGCTCATATTCAAGCATATGAGATTGATTCAGCTAGTGGAAGATATTGTCTGGTTGAAAGAGTCGTACACTTTTCCGAACTTGCAAAAGTGTTACTTCATATATACCCAATTTTACAGATTCCAGACAAGTGTGAAGATGATGAGCCTTTTATGCCAACATTCCAGGTTTCTAAAGAAAAGGCGAAGAGTTTGGGACTCGAATTCATTCCTTTAGAAGTGAGTCTCAAGGAGACCATTGAAACATTCAGCAAAGAGGTGAATAGAAGAATGAGCAGCAATGTAGGAAAATTGGTGTGTGTCACCGGTGCTTCCGGTTACATTGCTTCATGGATTGTTAAGTTCCTCCTTCAACGTGGTTACACTGTAAGGGCAACGGTTCGAAACCCAAGTGATAAAAAAAAGGTAGAACATTTGCTTAAACTAGAAGGTGCAAAGGAGAGACTGCAGCTGTTAAAGGCAGATCTTTTGGGTGAAAATTCCTTTGACTCCGTTGTTGAGGGCTGTGATGGTGTCTTTCATACTGCTTCTCCTTTTGTAATCAACGTCAAAGACCCACAGGCAGAACTACTTGACCCAGCTGTGAAGGGAACTCTTAATGTTCTTAAATCATGTGTAAAATCATCATCCGTTAAACGAGTTATCTTGACATCTTCTGTAGCTGCAGTTGCATATAATGAAAGGCCTAAAACTCCCCAAGTTGTAGTTGATGAAACCTGGTTTTCTAATCCAGACTATTGCAGGGAATTAAAGTTCTGGTATTTGCTTTCAAAGACTTTGGCTGAGGATGCTGCCTGGAAATTTGCAAAAGAAAATCACCTTGACTTGATTTCTATTAACCCAGCAATGGTTATAGGACCGCTTTTGCAACCAGAGCTTAACACTAGTGCTGCTACTATTTTAAACTTAATAAATGGTTCAGAAACTTTTCCGAATGATACTTATGGATGGATAAATGTGAAGGATGTTGCTGATGCCCATATTCAGGCATATGAGATTGCTTCGGCTAGTGGAAGGTATTGTTTAGTCGAAAAAGTGGCACACTACTCTGAACTCGCCACCATTTTACGTCATTTGTATCCCACATTTCAAGTACCACAAAAGTCTGCAGACGATAAGCCATATGTACCTACATTTCAAGTTTCCAAAGAAAAGGCAAAAACCTTGGGGATTAAATTTATTCCTTTGGAAGTAAGTCTGCCAGAGACTGTGGAAAGTTTGAAAGAAAGGAACTTTGTCAACTTTTAATTTCCAATATCTCTCCAGGCCAGGAGTCAGCTTGAAATAAATTGTTTTGAAATGGAAAGGTTGTAATAAAACAAGATTACTTGTTGCTTTTATTTCTGTTTGTAATCGTGAATAATAATTAAACAATTCTTGTGGTATAATAAAATCATTATATAATAACTACAATTGCT 2130 0.3897 MSSNAGKLVCVTGASGFIASWIIKFLLQRAKLEKVDHLLKFDGAKERLHLFKADLLEEGSFDSAFEGCHGVFHTASPVHFVVTDPQSQLIDPAIKGTLNVVKSCAKWPSVKRVVLTSSVAAVLYNDKPRTPDVVVDETWFSDPNFLRENEKWYAFAKTSAEEAARMFLNDYDIKLIVINPSMTIGPLLQPEINASSSSILNVINGSKTFPNHSFGWINVKDVANAHIQAYEIDSASGRYCLVERVVHFSELAKVLLHIYPILQIPDKCEDDEPFMPTFQVSKEKAKSLGLEFIPLEVSLKETIETFSKEVNRRMSSNVGKLVCVTGASGYIASWIVKFLLQRGYTVRATVRNPSDKKKVEHLLKLEGAKERLQLLKADLLGENSFDSVVEGCDGVFHTASPFVINVKDPQAELLDPAVKGTLNVLKSCVKSSSVKRVILTSSVAAVAYNERPKTPQVVVDETWFSNPDYCRELKFWYLLSKTLAEDAAWKFAKENHLDLISINPAMVIGPLLQPELNTSAATILNLINGSETFPNDTYGWINVKDVADAHIQAYEIASASGRYCLVEKVAHYSELATILRHLYPTFQVPQKSADDKPYVPTFQVSKEKAKTLGIKFIPLEVSLPETVESLKERNFVNF 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00889 638 CDD FR_SDR_e 9 290 - -
Pste1g00889 638 Gene3D - 320 638 - -
Pste1g00889 638 Gene3D - 7 312 - -
Pste1g00889 638 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 321 627 - -
Pste1g00889 638 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 306 IPR036291 -
Pste1g00889 638 FunFam Dihydroflavonol reductase 6 312 - -
Pste1g00889 638 Pfam NAD dependent epimerase/dehydratase family 322 555 IPR001509 -
Pste1g00889 638 Pfam NAD dependent epimerase/dehydratase family 9 231 IPR001509 -
Pste1g00889 638 CDD FR_SDR_e 322 613 - -
Pste1g00889 638 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 316 631 IPR036291 -
Pste1g00889 638 FunFam Dihydroflavonol reductase 319 638 - -
Pste1g00889 638 Coils Coil 358 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00889 Pste-Chr1 2741388 2756228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00889 315 638 Miscellaneous Gene Families AT5G19440 69.753 5.42e-173 493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00889 1 2741388 2756228 Pste1g00889 1 2741388 2756228 ECH