Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00813 TTGGAACCAAGCCAAACATTGTGTACAAGGCCAATACAACTACCTTCCCTTTTGTTCTTCCCAATTTCTTGCAAAGCATAAGAAGCATGTCTACAGTTGCATTCGAGACTGTCTTCCCTCTTTGTCATAGTAAACCTTCACTTTATCGCCTCAAACATATTCCATTGAGACCCTTTTTTATCACTTGCTCTTCCAACCTTCATGATGCTTCCTTCATCTTCGGCCAACCTCAAAGGACTCTCTCTCCAGTGCATGCAGCTACCCTTACAGACACACCTGTCCTCCACTCCCTTCAATGCCCTGATAACACCAACACTTTCGAAATCGACCAAATCCAAATGGTGGAGGGAAAGATTTTTGTGAAATTAGATCATGGAAAGGGTTTGAGAGATAGGGAGCTTAGGGTGTCTTGCAATTTACCCGGAAAATGGATTCTTCACTGGGGAGTTACCTATGATGGTGATGTTGGAAGGGAGTGGGATCAACCTCCTCATGATATGATACCCTTCGGATCTGTTCATATAAAGGACTATGCAATAGAGACCCCTTTGATGAAGTCATCCTTATCTGCTGAAGGAGATACACTTCATGAAGTCAGGATTGATCTTAAAGCCAACAATGGAATTTCGGCAGTTAATTTTGTTCTCAAGGATCAGGAAGCTGGAGTTTGGTATAAAAAAGGAAGAAGAGATTTCAAGGTTTCTTTGATCAACGACCTTAAGACGGATACTAATATTATTGGACCTACAAGGGGTTTTGATTTATGGCCAGGGAATTTTGGGCAATTATCTAAAATGTTCCTCAAGTCAGAAGTTGACCAAGATGACAGCAGTGAATCCCAAGATGACAGCAGTGACTCCCGAGTTTCAGAACAAGAAAACAATAAACCAGAAGGTTTTTATGAAGAACTGCCTATCACAAAGATGGTTATGGTCACTAACTCTATTAGTGTCTCAACCAAAAAATGCTTCGAATCTGGGGCAGTTAAGGACCTTTTATATTTTGAAACTGATCTTCCTGGAGATATTGTCATTCACTGGGGGGTTTGTAGGAATGATTCAAGAAGGTGGGAAGTTCCACCTCCTCCTTATCCACCTGGCACAGTGTCATTTAAAGATAGGGCTTTGAGAACTCAATTACGGCCAAGAGATGGTCTAAAAGGATCTTCAGCACTAATCACTTTAGAAGAAGAATTTTCAGGATTTGTTTTTGTTCTTAAGCAAAATGAAAACACTTGGTTCAAGTACATGGGAAATGACTTCTATATCCCCCTCGCAAGTTCTAGTTGCTTGCTTGATATTGGCAACAAAGAGGATCAGTCAGAAGGTGTGCAGAGGAAAGTGATTAGTCAAGAAAATTCTTTCTTTCCTTTTACTGATATTATACCCAATGAAATAAAAAATTTGGTCACAGACAATTCTTCTGGGAAGAGTCAGAAGACAAAATCCAAAATAGCACCACGAAACATTTTTCAAGAAATTGAAAGACTGGCTACTGAAGCCTATAATATATTCAGAAGCTCCATTCCAACTTTCTCTAAGGCAACTACTGCAAAACCTGAAGCAACTATTGTGGAACCTGAGACAACTACTGTGGAACCTGAGACAAGTATTATGGAACCTCAGGAAACAACTATTGTGGTATCTGAGGCTTCCGTGGAATCAGAGGCACTGTCCCTGGATTCAAAAATATGCTCAGGGACAGGTACAGGGTATGAAATATTATGCCAAGGGTTTAACTGGGAATCTCATAAATCTGGAAGATGGTACATGGAGCTTAAAGAGATAGCTCCAGAGCTAGCATCACTTGGTTTCACTGTGGTCTGGTTACCACCACCTACAGAATCTGTTTCACCTGAAGGATACATGCCAAAGGATTTATATAATTTAAATTCCAGATATGGAAACATCGATGAACTGAAAGATTTGGTGAAAACATTTCATGAAGTTGGAATCAAAACTCTAGGAGATGCTGTTTTAAACCATCGCTGTGCTCATTATCAGAATCAGAACGGTGTTTGGAACATATTTGGTGGCTCTCTTAACTGGGATGACCGTGCAATTGTAGCTGACGATCCATATTTTCAGGGTCGGGGCAATAGGAGTAGTGGAGATAATTTTCATGCTGCTCCAAATATTGATCATTCACAGGAATTTGTGAGAAAGGATCTCAAAGAATGGTTATGCTGGTTGAGGAAAGAAATTGGATATGATGGATGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATAGAGGCAAGTGAACCTTATTTTTGTGTGGGAGAGTACTGGGATTCTCTCAGTTATACATATGGCGAAACGGATCATAATCAAGATGCTCATAGGCAGAGGATAATTGACTGGATCAATGACGCTAATGGTACCTCTGGTGCATTTGATGTTACCACAAAAGGAATTCTTCACTCTGTATTGGAAAGATGTGAATATTGGCGATTGTCAGATGAGGAGGGAAAGCCTCCAGGCGTTGTTGGGTGGTGGCCATCTCGTGCTGTTACGTTTATAGAGAATCATGACACCGGTTCCACTCAGGGCCATTGGAGATTTCCCAGTGGAAAAGAAATGCAAGGATATGCTTACATTCTTACTCACCCAGGAACACCATCAGTGTTTTATGATCACATTTTCTCACAGTATAAAAATGAAATAGCAAGTCTAATATCTGTCAGGAGGAGGAACAAGATCCACTGCAGGAGCACACTTCAAATCAGTAAAGCAAAAAGGGATGTTTATGCAGCCATCATCGATGAAAAAGTTGCTATGAAGATTGGACCTGGACATTTTGAACCACCAAATGGTTCCCACGAATGGTCATTAGCCGTTGAGGGAAAATACTATAAGATTTGGGAAGCATCA 2891 0.4071 MSTVAFETVFPLCHSKPSLYRLKHIPLRPFFITCSSNLHDASFIFGQPQRTLSPVHAATLTDTPVLHSLQCPDNTNTFEIDQIQMVEGKIFVKLDHGKGLRDRELRVSCNLPGKWILHWGVTYDGDVGREWDQPPHDMIPFGSVHIKDYAIETPLMKSSLSAEGDTLHEVRIDLKANNGISAVNFVLKDQEAGVWYKKGRRDFKVSLINDLKTDTNIIGPTRGFDLWPGNFGQLSKMFLKSEVDQDDSSESQDDSSDSRVSEQENNKPEGFYEELPITKMVMVTNSISVSTKKCFESGAVKDLLYFETDLPGDIVIHWGVCRNDSRRWEVPPPPYPPGTVSFKDRALRTQLRPRDGLKGSSALITLEEEFSGFVFVLKQNENTWFKYMGNDFYIPLASSSCLLDIGNKEDQSEGVQRKVISQENSFFPFTDIIPNEIKNLVTDNSSGKSQKTKSKIAPRNIFQEIERLATEAYNIFRSSIPTFSKATTAKPEATIVEPETTTVEPETSIMEPQETTIVVSEASVESEALSLDSKICSGTGTGYEILCQGFNWESHKSGRWYMELKEIAPELASLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGNIDELKDLVKTFHEVGIKTLGDAVLNHRCAHYQNQNGVWNIFGGSLNWDDRAIVADDPYFQGRGNRSSGDNFHAAPNIDHSQEFVRKDLKEWLCWLRKEIGYDGWRLDFVRGFWGGYVKDYIEASEPYFCVGEYWDSLSYTYGETDHNQDAHRQRIIDWINDANGTSGAFDVTTKGILHSVLERCEYWRLSDEEGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYILTHPGTPSVFYDHIFSQYKNEIASLISVRRRNKIHCRSTLQISKAKRDVYAAIIDEKVAMKIGPGHFEPPNGSHEWSLAVEGKYYKIWEAS 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00813 935 SUPERFAMILY (Trans)glycosidases 543 861 IPR017853 -
Pste1g00813 935 Gene3D - 878 934 IPR013780 -
Pste1g00813 935 SUPERFAMILY Glycosyl hydrolase domain 878 933 - -
Pste1g00813 935 Pfam Alpha amylase, catalytic domain 571 854 IPR006047 GO:0005975
Pste1g00813 935 MobiDBLite consensus disorder prediction 242 271 - -
Pste1g00813 935 SMART alpha-amyl_c2 874 934 IPR012850 GO:0004556|GO:0005509|GO:0005975
Pste1g00813 935 MobiDBLite consensus disorder prediction 242 269 - -
Pste1g00813 935 Gene3D Glycosidases 544 877 - -
Pste1g00813 935 SMART aamy 544 873 IPR006047 GO:0005975
Pste1g00813 935 PANTHER ALPHA-AMYLASE 515 934 - -
Pste1g00813 935 CDD AmyAc_arch_bac_plant_AmyA 545 884 - -
Pste1g00813 935 Pfam Alpha-amylase C-terminal beta-sheet domain 875 933 IPR012850 GO:0004556|GO:0005509|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00813 Pste-Chr1 2527198 2536020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00813 1 935 Glycoside Hydrolase AT1G69830 59.197 0.0 1109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00813 1 2527198 2536020 Pste1g00813 1 2527198 2536020 ECH
Pste7g00867 7 8055971 8065438 Pste1g00813 1 2527198 2536020 PCT