Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00712 ATGGCTTCTAAATTCAAGCGTGGGTCCTCTACGGTTCGTAAGATCACGCAGCTGAGCAATGATATGGATCAGGAGAGTGAGAATGGGAGTGTTGGTCTTGCTACCTACACGGTTCACATTCCTCCAACGCCAGATAACCAGCCTATGGAGATTTCTCTGGAGAGGTCGAGTTCTCGGAGAGTGGAGGACCAATACGCTTCTAGTTCTATGTTCACTGGTGGTTTTAACCAGTTCACACGTGCCCATTTGAAGGACAAGGTGATTGAGTCCGAATCCAGCCACCCCCAGATGGCTGGTGCAAAAGGGTCCTCTTGTGCAGTGCCTGGGTGTGATGGAAGAGTTATGACTGATGAGAGGGGGTTGGATGTGGTTCCCTGTGAGTGTGATTACAAGATTTGTAGGGATTGTTATAGGGATGCTTTGAGGGCTGGTGCGGGGATTTGTCCTGGTTGTAAAGAGCCTTACAAGGAGCCTGAGGTGCGAGGTCTGACTAACTCACAGCCACTGCCTTTGCCTCCTGGTGCTGGGGTTAGTAAGATGGAGAGGAGGTTGTCGTTGATGAAATCGGGGGCGTTGACCAGGAGCCAGACTAATGAGTTTGATCATGCTCAATGGTTGTTCGAAACCAAGGGGAGTTATGGATATGGAAATGCCATGTGGCCTAAAGACTCTCAACCTGATTCCAATTCTGGTTCTGGTTCTGGTTCTGAATGGATGGGGGGTGATCCTAATGTATTCAAGGAAAAGCAGTGGAGGCCCTTGACCCGGAAATTGAGCATATCTGCTGCAGTTCTCAGTCCTTATCGGCTCATGATATTAATTCGTCTGGTGGTTCTAGTTTTCTTTCTAAAGTGGAGGGTCCAAAACCCCAACGATGATGCAATTTGGCTGTGGGGCATGTCTGTTGTTTGTGAAATCTGGTTTGCCTTCTCCTGGCTGCTTGACCAGCTTCCTAAGCTCTTCCCTGTAAATCGAGTTGTTGACCTAGATGTTTTGAAGGAGAAGTTTGAAACTCCTAATCCCACCAATCCTACTGGGAAGTCTGATCTTCCAGGAATAGATATGTTTGTGTCAACTGCTGATCCAGAAAAGGAACCACCCCTAGTTACTGCAAATACTATTCTTTCTATTCTAGCTGCTGATTATCCTGTTGAGAAACTTTCATGTTATGTCTCTGATGATGGCGGTGCACTTCTAACTTTTGAGGCCATGGCAGAGGCAGCGAGTTTTGCCAACTTGTGGGTTCCATTTTGTCGGAAACATGACATTGAACCCAGGAACCCAGAATCTTATTTTAACCTGAAGAGAGATCCCTACAAGAACAAAGTGCGGTCTGACTTTGTGAGGGACCGCAGGCGAGTAAAGCGTGAGTATGATGAGTTCAAGGTTCGGATTAACAGCCTTCCTGATTCGATCCGGCGGCGTTCCGATGCTTACAATGCCACAGTAGAAATGAAAGCAATGAAGAAGTGGAGAGAGAACGGAAATGAAGAGCCAATGGAGAATTTGAAAATTCCTAAAGCTACATGGATGGCTGATGGCACTCACTGGCCTGGTACATGGACAACTGCTGCATCCGAGCATTCCAGGGGTGATCATGCCAGTATCATACAAGTAATGTTAAAACCCCCAAGTGATACACCATTGAATCTCACATCATCAGATTCAAATGCCTTGGATTTCTCTGAAGTTGATATTCGTCTTCCTATGCTTGTTTACGTTTCTCGTGAAAAACGACCTGGCTATGATCACAACAAAAAGGCTGGGGCCATGAATGCCCTGGTTCGAGCCTCGGCTGTAATGTCCAATGGTCCATTCATACTTAATCTTGACTGTGATCATTACATATATAACTCTCAGGCTTTGAGAGAAGGAATGTGCTTCATGATGGACCGTGGAGGGGAGAGGCTATGCTATGTTCAATTTCCTCAAAGGTTTGAAGGAATTGACCCCAATGATCGGTATGCGAATCATAACACAGTGTTTTTTGATGTCAATATGCGGGCTCTTGATGGAATTCAAGGTCCAATGTATGTAGGCACAGGATGCCTATTTCGAAGAACTGCTCTCTATGGGTTTGATCCACCACGGAACAAAGAAGAAAGCGGTTGGTTTGGTGGAAAGAAGAAGAAATCCTCAACAGTGGCCTCAGTCCCAGAAGGTGGTGGTGAGGAACAGTCATTGAGGAGTGGGGGCATGGAGGATGAAGAAATGAGTGTGGCTCTTGTTCCCAAGAAATTTGGCAACTCAAGTCTTCTGGTTGATTCAATAAGGGTGGCTGAGTTCCAAGGGCTGCCCCTTGCTGATCATTCATCTATAAAATATGGTCGTCCACCGGGTGCTCTAACTCTCCCTCGCGATCCTCTCGATGCTGCTACTGTTGCTGAGGCCATCAATGTTATCTCATGCTGGTATGAGGACAAGACTGAATGGGGTCTCAGAGTTGGGTGGATTTATGGGTCCGTCACTGAGGATGTTGTCACAGGCTATAGAATGCACAATAGAGGATGGAAGTCAGTGTATTGTGTTACAAAAAGAGAGGCTTTCCGCGGCACCGCTCCAATCAATCTCACAGACAGGCTGCATCAGGTTCTTCGGTGGGCTACTGGCTCAGTTGAAATCTTCTTTTCTCGCAACAATGCACTTTTGGCTAGCTCTAGATTGAAATTTCTGCAGAGGATTGCTTACCTTAATGTTGGAATTTACCCATTCACTTCCATCTTTCTTATTGTCTATTGCTTCATTCCTGCTCTTTCACTTTTCACTGGCCAGTTCATTGTTCAAACCCTTCAAGTCACCTTCCTAGTTTACCTCTTGGGCATCACCTTGACCCTTGTCATCCTTGCTGCTTTGGAGATCAAGTGGTCTGGCATTGAGCTTGAAGAATGGTGGAGGAACGAACAATTCTGGTTGATTGGAGGCACAAGTGCACATCTTGCTGCCGTGCTTCAGGGTCTACTAAAGGTTATGGCTGGCATTGAGATTTCATTCACTTTGACATCAAAATCTTCTGGTGATGACGAAAATGATGAATTTGCTGATCTTTATGTGATTAAGTGGACATCTCTAATGATACCACCATTAACTATAATGATGGTCAATTTGATAGCAATTGCTGTTGCAGTAAGCAGAACTATATACAGTGAGGATCGTGAATGGAGCAGTTTGCTTGGAGGTGTGTTTTTCAGTTTTTGGGTCTTGTCTCATTTGTATCCCTTTGCAAAAGGACTAATGGGTAGAAGGGGTAGGACACCCACAATTGTATTTGTATGGTCAGGTCTAATATCAATTACTATCTCACTCCTTTGGGTTGCTATTGACCCTCCTTCTGGCAGCAGCAACATTGGAGGCTCATTCCAATTCCCTTGATTCCTAGTGCTCACTTTCCAGTGTACCACTTGTGGGTTTATGAGATTTTGTAGTTACCATTCATTGTTCAACAAGCTATTGCTTATATTTTATTGATCATACAAGAAGGAATCAATCATACATTTTTTTACCCTTCACGTTTTCAAGCTTTAACTTTGGAACCCGTCAGATTAATTGAACGATGACTATGGC 3561 0.4507 MASKFKRGSSTVRKITQLSNDMDQESENGSVGLATYTVHIPPTPDNQPMEISLERSSSRRVEDQYASSSMFTGGFNQFTRAHLKDKVIESESSHPQMAGAKGSSCAVPGCDGRVMTDERGLDVVPCECDYKICRDCYRDALRAGAGICPGCKEPYKEPEVRGLTNSQPLPLPPGAGVSKMERRLSLMKSGALTRSQTNEFDHAQWLFETKGSYGYGNAMWPKDSQPDSNSGSGSGSEWMGGDPNVFKEKQWRPLTRKLSISAAVLSPYRLMILIRLVVLVFFLKWRVQNPNDDAIWLWGMSVVCEIWFAFSWLLDQLPKLFPVNRVVDLDVLKEKFETPNPTNPTGKSDLPGIDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINSLPDSIRRRSDAYNATVEMKAMKKWRENGNEEPMENLKIPKATWMADGTHWPGTWTTAASEHSRGDHASIIQVMLKPPSDTPLNLTSSDSNALDFSEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAVMSNGPFILNLDCDHYIYNSQALREGMCFMMDRGGERLCYVQFPQRFEGIDPNDRYANHNTVFFDVNMRALDGIQGPMYVGTGCLFRRTALYGFDPPRNKEESGWFGGKKKKSSTVASVPEGGGEEQSLRSGGMEDEEMSVALVPKKFGNSSLLVDSIRVAEFQGLPLADHSSIKYGRPPGALTLPRDPLDAATVAEAINVISCWYEDKTEWGLRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKREAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRLKFLQRIAYLNVGIYPFTSIFLIVYCFIPALSLFTGQFIVQTLQVTFLVYLLGITLTLVILAALEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSSGDDENDEFADLYVIKWTSLMIPPLTIMMVNLIAIAVAVSRTIYSEDREWSSLLGGVFFSFWVLSHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSNIGGSFQFP 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00712 1122 Pfam RING/Ubox like zinc-binding domain 107 156 - -
Pste1g00712 1122 MobiDBLite consensus disorder prediction 700 733 - -
Pste1g00712 1122 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 554 706 IPR029044 -
Pste1g00712 1122 FunFam Cellulose synthase-like protein D3 88 168 - -
Pste1g00712 1122 Pfam Cellulose synthase 353 1111 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pste1g00712 1122 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 252 1092 - -
Pste1g00712 1122 MobiDBLite consensus disorder prediction 1 28 - -
Pste1g00712 1122 FunFam cellulose synthase-like protein D3 558 695 - -
Pste1g00712 1122 SUPERFAMILY RING/U-box 90 158 - -
Pste1g00712 1122 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 168 IPR013083 -
Pste1g00712 1122 SUPERFAMILY Nucleotide-diphospho-sugar transferases 368 917 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00712 Pste-Chr1 2239049 2243153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00712 5 1122 Glycosyltransferase AT3G03050 76.018 0.0 1766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00712 1 2239049 2243153 Pste1g00712 1 2239049 2243153 ECH