Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00699 ATGGGACTCCGATCGGTGTTGGATGGTGGCGAGCTGAGAAGGGAATTCGAAAAGAGTGGATTTGACCCTAAATTCATTCCAATCATATGGAAGCATGTGAATGCGAATGTGATTGCGAATGTCGAAGAAGAAGAAGAAGAAGATTGGGATTGGGAAAAACGAAATGGAGCTTTCGTGGAGGCTGTGATAATGAGGTATGATACTCGTTTGGGCAAATATGGTGGCAAACCGCGTCCCGGTGGCCCTAGAGCCACTTTGTGTATTTCATCTCAGGTAGGATGCAAAATGGGTTGCAAATTCTGTGCCACTGGATCCATGGGATTCAAAAATAACCTATCATCTGGGGAAATTGTGGAACAGCTCATTCATGCCTCTGCTTTCTCACAAATCCGCAATGTTGTTTTCATGGGAATGGGAGAGCCTCTCAACAACTACTCTGCTGTGGTAGAAGCTGTTCGCATCATGACTCGATTGCCATTTCAATTGTCTTTGAAAAGGATTACCATCTCAACGGTTGGAATCATTCATGCTATCAACAAGCTTCATGATGACCTGCCTGGTTTGAACTTGGCAGTCTCACTGCATGCACCCGACCAAGCCATCCGTTGCCAGATAATGCCTGCTGCTCGAGCTTTCCCTTTGGAAAAACTTATGGATTCACTGCACCAATATCAAAGAAAAAGTCTGCAGAAAATATTAATTGAATACATAATGCTTGATGCGGTGAATGATGAAGAGCAGCATGCCCATCAATTGGGAAAACTTTTAGAGACATTTGAAGTGGTAGTGAACTTAATACCTTTCAACTCTATTGGTACCTTGAGTCAGTTCAAACCTACCAGTGCGCAGAAAGTCTCAAATTTTCAGAAAATTCTTAGAGGTACCTATAATATTCGAACAACAGTTCGAAAGCAGATGGGTCAGGACATAAGTGGTGCTTGTGGACAATTGGTGGTTAGCATGCCTAACAAGTCTCTTGGCAATGCAGATCCCGTAACGGACATAGAAGATCTTGTTAGTTGATATCATATTGCTTCAATATAATTCCTTCCCTGAATTTTAATTGTCTCCTAGTTTTATGTATTGTTTTTAAATTTAATTCTACAGAAATTAGAATCAGAAGTCAACCATAGAAGTCAAGGTGCACTGACTGAAGTGCAACCAAAATTCTTGATATGAATGTGAGATAATCTTCTGGGTTTTGAATTTTGAAAGAATTGAAGTAAAGGAAAAAAAAAAG 1240 0.4065 MGLRSVLDGGELRREFEKSGFDPKFIPIIWKHVNANVIANVEEEEEEDWDWEKRNGAFVEAVIMRYDTRLGKYGGKPRPGGPRATLCISSQVGCKMGCKFCATGSMGFKNNLSSGEIVEQLIHASAFSQIRNVVFMGMGEPLNNYSAVVEAVRIMTRLPFQLSLKRITISTVGIIHAINKLHDDLPGLNLAVSLHAPDQAIRCQIMPAARAFPLEKLMDSLHQYQRKSLQKILIEYIMLDAVNDEEQHAHQLGKLLETFEVVVNLIPFNSIGTLSQFKPTSAQKVSNFQKILRGTYNIRTTVRKQMGQDISGACGQLVVSMPNKSLGNADPVTDIEDLVS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00699 340 ProSiteProfiles Radical SAM core domain profile. 80 309 IPR007197 GO:0003824|GO:0051536
Pste1g00699 340 PANTHER 23S RRNA METHYLTRANSFERASE 54 324 IPR040072 -
Pste1g00699 340 PIRSF Cfr 30 332 IPR004383 GO:0006364|GO:0008173
Pste1g00699 340 Pfam Radical SAM superfamily 89 247 IPR007197 GO:0003824|GO:0051536
Pste1g00699 340 SFLD adenosine C2 methyltransferase (RlmN-like) 42 321 IPR004383 GO:0006364|GO:0008173
Pste1g00699 340 Pfam 4Fe-4S single cluster domain 93 180 - -
Pste1g00699 340 SFLD methyltransferase (Class A) 42 321 - -
Pste1g00699 340 CDD Radical_SAM 93 294 - -
Pste1g00699 340 FunFam 23S rRNA methyltransferase 40 324 - -
Pste1g00699 340 SUPERFAMILY Radical SAM enzymes 83 246 - -
Pste1g00699 340 Gene3D Aldolase class I 36 325 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00699 Pste-Chr1 2197934 2201408 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00699 1 2197934 2201408 Pste1g00699 1 2197934 2201408 ECH