Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00691 TGCATATCCTTATTTCTTAATATCATTATGATGGTGTATAAATATAGAGTGAAGGGCGAAAACAAAGGGATGGAGAGAGAAAAAACACAACTACACAGAAACTGAAGACATCAAAATAAAATTATTATGGATCATAAGTTACGTTGTTTTGGGACAATACCCAAAATTTCTTTTCTTTTGCTACTTTCTCTGCTTCTCTTCAGTTTCGTTAACGCAGCCTTCGACCTCGCTACTATACCCTTCAACGACGGCTATTCTCCACTTTTCGGAGATAGCAACGTTGTTCGCTCCGCCGATGGCAACGGTGTACAACTCCTTCTCGATCGCTACACAGGCTCGGGTTTCATTTCCTCCAATATGTACAACTATGGATTCTTCAGCGCCAAAATCAAGTTGCCGTCGAATTATACGGCTGGTATTTGCGTTGCCTTTTATATTTTACATTGATGAAGTTCCAATTAGAGAAGTGTTGCGAAGTGAGGAGATGGGAGCTGATTATCCATCAAAGCCAATGTCATTATATGCCACTATATGGGATGCATCAAGTTGGGCTACATCGGGTGGAAAATACAAAGTGAACTATAAGTATGCACCATTTGTGACTGAATTCAAGGACCTAGTCCTAAAGGGTTGTACGGCCGATCCCATCCAAGAGGTTTCGGGCCTGGAGTCTTGCGCCGGCCAACACCACGATCTCGAGTCTCAAGACTACGCCACCGTGACCCCCATGCGCCGCCTCTCCATGCGGCGGTTCCGACAGCGTTTCATGTACTATTCATATTGCTATGATACATTAAGGTACCCCGTGCCACCACCCGAGTGTGTCATTTCACCCTCGGAGAAACAAAGGTTTAAGGAGACTGGAAGATTGAGATTCGGTGGCAGCCACCGCCGGCAATCACGAAGGAGGAGCCGTAGATCAACTCCGGTGTATAACACCGATATGGGTGATATGTGATGAATGATATTTTGATTATGTATATAATAGTGTCCTTTTTTTAATGTCTTTATATTTATGGTTTTTTCGTCATTATGTATTATTTATTTGTTGAGAGACATAAATAAATTAATCCAAGCGATTATATATGGTCATTATTTCTTTAATAAATGTGTTTTGG 1118 0.4177 MATVYNSFSIATQARVSFPPICTTMDSSAPKSSCRRIIRLVFALPFIFYIDEVPIREVLRSEEMGADYPSKPMSLYATIWDASSWATSGGKYKVNYKYAPFVTEFKDLVLKGCTADPIQEVSGLESCAGQHHDLESQDYATVTPMRRLSMRRFRQRFMYYSYCYDTLRYPVPPPECVISPSEKQRFKETGRLRFGGSHRRQSRRRSRRSTPVYNTDMGDM 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00691 220 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 138 176 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Pste1g00691 220 Gene3D - 45 176 - -
Pste1g00691 220 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 46 176 IPR044791 GO:0004553
Pste1g00691 220 Pfam Glycosyl hydrolases family 16 47 97 IPR000757 GO:0004553|GO:0005975
Pste1g00691 220 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 179 IPR013320 -
Pste1g00691 220 MobiDBLite consensus disorder prediction 194 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00691 Pste-Chr1 2177547 2180766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00691 47 197 Glycoside Hydrolase AT1G32170 69.536 6.25e-76 231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00691 1 2177547 2180766 Pste1g00691 1 2177547 2180766 ECH