Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00640 ATTTCTATTTTGTATTTCCTTTCAAACAAACAAATTAACTTCCTCCTCATAACAAATAAAAGGAGGGAAAACAAAAGAGAAAAAATCCAATGGTAGTAGCATAGTTATTGCTTCCACACCGATAGTTTTGTTTGTGAAACCCGATTCAACAACTCTGAATTGTGAAGCTATTCGTTTTGGAGCAATCATATTCATCACTGTCCAAACTCCAATCTGTCGAGGTTTTTTATTTCCATTAAAATTTGCTGTCGAATAATTAATTATTTGTATATTAATATGAATTTTTGTTATTCTTTGGTTTGTCAGAAGGTTAGCAACAATTTGGGAAGTTTGAGAAAGCAATAGGAGGAGTAGAGTGGGTTTAGGATTGTTGTTAAAATAATAGGAAAAGTTTTGTTTCTGATGGTAATGATACAGAGTGCGAAGTAGGAAGGGACATCATGGCTACTGCTGCAGTAATTGGATTGAGTGGAGGAAAGAGGCTCTTGAGTTCATCTTACCATTACTCAGATATTATAGAAAAGCTTTCTTACGGCAGCGACTTTGGATCCACCCACTATCACAATGCTCCTACAAAACCTGTCATAGTTGCCAAGAAGCCATCCAACTACACTCCAACTTTTCCTGCACCCAACCAGCAGAATCAGTCCATTAAGGCTCTTAAAGAGCATGTTGATGATGCCCCCACCATTGCGGATCCATGGTTTCAGAGTTACAACTCTAATGACTTAGAGGTGGAAAGCTCCGAAATGGGCTATTCTGTGGAGGCTCTTCTTTTGCTGCAGAAGTCTATGCTGGAAAAGCAGTGGAACCTTTCCTTCGAAAGGGAAGTGCTAACCACCAAGGAAAATACCTGCTCCAAAGTGGCAGTCACTTGTTCTGGGGTGTCTGCAAGGCAAAGAAGAATGAATACCAGGAGGAAGACCGCTGTTAAAACTGCCTCCACAATCATTCAACCTTGCGGTGCTAAGCAGTTGAATACCAAAATCAATCCACAGCTGCTTCAAAGCCGTTTGAAGGGCTATGTGAGTGAGGAATTGCTCTCTCATGCAGAAGTTGTAAACCTATCACAGAAAATAAAAGTTGGGCTTTCCTTAGAGGAGCATAAATCAAGAATGATAGCTGACTCACACAATACGCAAACCTTTTTTATGAGTTTCAGACTGAAGGAAAGACTAGGATGTGAACCCTCTGATGATCAAATTGCAAACTCATTGAAGATTTCTCGCACTGAACTACGAACAAAAATGATAGAATGCTCTCTGGCTAGAGAAAAGTTAACTATGAGCAATCTTCGTTTAGTTTTGTCTATTGCTCAAAGATATGATAACCTGGGAGCAGAGATGGCTGACCTTGTTCAGGGTGGCTTGATTGGACTACTTCGTGGTATTGAAAAGTTTGATTCTTCAAAAGGGTGTAAGATTTCAACGTATGTTTATTGGTGGATACGTCAGGGTGTTTCAAGAGCTTTAGTTGAGAATTCAAGAACACTAAGATTGCCTGCTTTTTTGCATGAAAGATTATCTTTGATCCGTAATGCAAAATTTAGACTAGAAGAGAGAGGCATTACTCCAACTATTGATAGGATTGCAAAATACCTTAACATGTCTCAAAAGAAAGTCAGAAATGCTACTGAGGCAATCAGTAAAATTATCTCACTTGATAGAGAAGCATTCCCCTCTCTGAATGGTGTAAAAGGAGAAACTCATCATAGTTATATCGCAGATAATCGCGTTGAGAACATCCCGTGGAATGGAGTAGATGAGTGGGCACTAAAGGATGAAGTGAACAAACTCATTAATATGACCCTGGGAGAACGAGAGAGAGAAATTGTTCGTCTTTATTATGGACTGGATAGACTGGATAAAGAATGTCTTACGTGGGAAGACATTAGTAAACGGATAGGGTTGTCAAGAGAAAGAGTAAGGCAAGTCGGACTTGTTGCATTGGAGAAACTAAAACATGCTGCGAGGAAGAGAGAAATGGAGGCCATGCTATTGAAACATTAAATTTGGACTTATCATAGAGATATTTTACAATGTATATATACAGAGAGGAAGTATGTACCTAGAAATTTGACTTCCTGATTCAAAAAGAGGACAATTGATACAAGGGAACATTGAAGATTTGAAATCCCTTTGAATATGATTTTAATGCCAATAAATATGGGTAAATTTTGGTTTAATACTAAAAAATGTTGCTTTGAGTTGTAATAAAATTTATTTTCTTTTACAATGGATTTTATGTAGCTTAATACATGTCTAACGAATTTTGAATAAAGGTGAAAATATA 2292 0.377 MATAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYHNAPTKPVIVAKKPSNYTPTFPAPNQQNQSIKALKEHVDDAPTIADPWFQSYNSNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFEREVLTTKENTCSKVAVTCSGVSARQRRMNTRRKTAVKTASTIIQPCGAKQLNTKINPQLLQSRLKGYVSEELLSHAEVVNLSQKIKVGLSLEEHKSRMIADSHNTQTFFMSFRLKERLGCEPSDDQIANSLKISRTELRTKMIECSLAREKLTMSNLRLVLSIAQRYDNLGAEMADLVQGGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPAFLHERLSLIRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNGVKGETHHSYIADNRVENIPWNGVDEWALKDEVNKLINMTLGEREREIVRLYYGLDRLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKREMEAMLLKH 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00640 522 Pfam Sigma-70, region 4 456 508 IPR007630 GO:0003700|GO:0006352|GO:0006355
Pste1g00640 522 Pfam Sigma-70 region 2 282 349 IPR007627 GO:0003700|GO:0006352|GO:0006355
Pste1g00640 522 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 435 512 IPR013324 -
Pste1g00640 522 PANTHER RNA POLYMERASE SIGMA FACTOR RPO 115 519 - -
Pste1g00640 522 NCBIfam sigma-70 family RNA polymerase sigma factor 276 509 IPR014284 GO:0003700|GO:0006352|GO:0006355
Pste1g00640 522 Pfam Sigma-70 region 3 359 430 IPR007624 GO:0003700|GO:0006352|GO:0006355
Pste1g00640 522 CDD Sigma70_r4 446 507 - -
Pste1g00640 522 Gene3D - 435 516 IPR036388 -
Pste1g00640 522 Gene3D - 351 401 IPR036388 -
Pste1g00640 522 PRINTS Major sigma-70 factor signature 328 336 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste1g00640 522 PRINTS Major sigma-70 factor signature 495 506 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste1g00640 522 PRINTS Major sigma-70 factor signature 304 317 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste1g00640 522 PRINTS Major sigma-70 factor signature 480 495 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste1g00640 522 ProSitePatterns Sigma-70 factors family signature 1. 304 317 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste1g00640 522 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 352 408 IPR013324 -
Pste1g00640 522 Gene3D RNA Polymerase Primary Sigma Factor 100 350 - -
Pste1g00640 522 SUPERFAMILY Sigma2 domain of RNA polymerase sigma factors 188 350 IPR013325 GO:0003700|GO:0006352|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00640 Pste-Chr1 2045270 2050513 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00640 1 2045270 2050513 Pste1g00640 1 2045270 2050513 ECH