Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g00639 | AGGGAAGGGGTTTTGTTTTGAGTGTGTGACTGTTGTCTATCTTCTTCTCTGTGTATTTGAGTGTGGACATGGCTATCTCTCTTGGCCTCTTCTCTTCTCTTCTCCTCATGAGAAACCAGCACTCTCACTTTCACAAAGCCTTCTCCATCATCATCTGCGCTGCGTATGGTGCGAACCGTTACCTCTTCCACTGTCTCTCACTCCGGCCCCAGCAAAATCCGCGGCATCATGAAACCCCGCAAAGTGTCCCCCGAAATGGCTGCACTCGTCGGCGCTCACGAGATTTCTCGCACCCAAGTCCTCAAACTCATTTGGGCATACATTAAGGACAACAATCTTCAGGACCCTGAGGACAAGAGGACTATAAATTGTGATGAGAAGCTGAAGAAGGTGTTTCAAGGGAAAGATCGAGTTGGTATGCTAGAGGTTGCTCGCTTGATTAGCCCTCACTTCCTTAAAAGTGAAAGTTAGGTTTTTGTATGGAGGTCGTGCTTTTGTGTATTGGTGTGTTGAACAATTGCATATGGGAGTAGTATGTCCTGCGACATAGTAGTGTTTAGGTTTATTAGTACTTTGAATACAGAACGAGCATTGTTGAAGAGTTCGTTTTGATTTATGCAGTCTCTTTAACAAGCGTTAGTAATCACCTATTAGGTTTCCATTTGACATCTTTAATGTTAAATCTATGTTCTCA | 694 | 0.4395 | MVRTVTSSTVSHSGPSKIRGIMKPRKVSPEMAALVGAHEISRTQVLKLIWAYIKDNNLQDPEDKRTINCDEKLKKVFQGKDRVGMLEVARLISPHFLKSES | 101 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g00639 | 101 | SMART | swib_2 | 21 | 101 | IPR019835 | - | |
| Pste1g00639 | 101 | Pfam | SWIB/MDM2 domain | 23 | 96 | IPR003121 | - | |
| Pste1g00639 | 101 | ProSiteProfiles | SWIB/MDM2 domain profile. | 20 | 98 | IPR003121 | - | |
| Pste1g00639 | 101 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Pste1g00639 | 101 | PANTHER | SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D | 14 | 99 | - | - | |
| Pste1g00639 | 101 | CDD | SWIB-MDM2_like | 25 | 96 | - | - | |
| Pste1g00639 | 101 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Pste1g00639 | 101 | Gene3D | SWIB/MDM2 domain | 15 | 101 | IPR036885 | - | |
| Pste1g00639 | 101 | SUPERFAMILY | SWIB/MDM2 domain | 14 | 99 | IPR036885 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g00639 | Pste-Chr1 | 2043953 | 2045824 | Dispersed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | SWI/SNF-BAF60b | Pste1g00639 | SWIB | 2.1e-32 | No_clan |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste1g00639 | 1 | 2043953 | 2045824 | Pste1g00639 | 1 | 2043953 | 2045824 | ECH |