Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00577 AAAAACTATAAATGACAGTGTAAAAAGTAAAATCATCAACAAACATTGTGATTGCAGGTGAGTGCATAATAAATTAATAATTAAACTAAAAAAAAAAAATGTAAAATGGCCTTTTACCTGTGTATATTCAAGAAATAGCATTCCCCAAATTTGTATGTGGACTATGATGTCGATGGCGGCACGCGGACAAGTAGAAGCACGATGGATGTTTGGGCGCCACATGTCGGCACGTGCGACAAGGCAGTGGGAGGAGAAATGGGTGACTCTGCCGCCGGTGACCGCGGCGGCGACTGTGTCGGTGAAGGGAAAGGAGAATCTAAAGACAGCGTCATCCACTCCCACCACTGCGCTCAAATGGATCGTTCGGTGCTGCCCGCAGCTGCCCAAAACCCTCGTGCACAAGCTTTTCCGTCTAAGACAGGTTCGAATGGTCTCTCCCGAAACACAGATAAAAAAGGTGGCAGCTAAGGATACGTTGAACACTGGAGATCGTGTCTTGCTTCCTCAATCTGTTCATGTTAAACACTCTCGTCCGCATCCTCGTCCTCTTCTCACTCCCCAACAAATCCACTTTATCCGTGCTCTTGTTATATATAAGGATGCTTCCACTCTCGTCCTCAACAAACCTCCAGGAATGCCAGTTCAGAAATATCACTTCAAAGGAGATGTTGGCAATAGCAAAAAAATGCATCAAATAAAAAGAAAGTGGTTTATTTGTAAAAAAAGAGTGGTAAACGTTATTATTTATTACTCTTCTATTCTATCAAACACCATTGCATCTATTATCATCAATACAAAGTTTGAATGTCCATGTAATCAGTGGGATCGGTTGCCTTGTTTTGTGCATAGACTAGACAGAGACTGTTCTGGAATTTTGGTGATGGGAAGGACACAGACAGGTACTGGACTCCTGCATTCCATCTTCCGGGAGAAAACTTCCACAGCTGTAGATGATATTGGAAAAGAGAAGAGAATATTACAAAGAAGGTACTGGGCACTGGTCCTTGGATGTCCTAGACGTCCAAAGGGGTTGGTCAGCACTCCACTCGGTAAGGTCGTGGTTGATAATGGGAGATCTGATCGAATAACTATAGTTGACAATTCTACATTAATGTCATCAAAGCATGCAATTACAGAGTATCGAGTGATTGCATCATCATCACAAGGTACTCCAATAGTTGGGGATTACAAGTATGGATGGCAAGCTCACAGGAAGTGGGGACATTTTGATTTGCCTAATGCGGATGACTCAAGTGAAGACCTTGTAGATGAAGAAAAACTCCCCTTCGGCCTTAATTTGGACAAAGGGAGCATAACTGAGAATCATCCTCGTTTACATCTTCATTGCAAGCAAATAGTCTTGCCCAATATATCGCAAGCTCTGCAAAATGTCGAATCAGCTTCCAATTGTGATCTTTCACTAGTGGAAGAGCTTGAGTTAGTTGCCGATAAGCCTCCTTACATGCAAAGAAGTTGGGATGTCACAAATTAT 1492 0.4263 MWTMMSMAARGQVEARWMFGRHMSARATRQWEEKWVTLPPVTAAATVSVKGKENLKTASSTPTTALKWIVRCCPQLPKTLVHKLFRLRQVRMVSPETQIKKVAAKDTLNTGDRVLLPQSVHVKHSRPHPRPLLTPQQIHFIRALVIYKDASTLVLNKPPGMPVQKYHFKGDVGNSKKMHQIKRKWFICKKRVVNVIIYYSSILSNTIASIIINTKFECPCNQWDRLPCFVHRLDRDCSGILVMGRTQTGTGLLHSIFREKTSTAVDDIGKEKRILQRRYWALVLGCPRRPKGLVSTPLGKVVVDNGRSDRITIVDNSTLMSSKHAITEYRVIASSSQGTPIVGDYKYGWQAHRKWGHFDLPNADDSSEDLVDEEKLPFGLNLDKGSITENHPRLHLHCKQIVLPNISQALQNVESASNCDLSLVEELELVADKPPYMQRSWDVTNY 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00577 446 CDD PseudoU_synth_RluA_like 153 356 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pste1g00577 446 Gene3D Pseudouridine synthase 136 416 - -
Pste1g00577 446 Pfam RNA pseudouridylate synthase 153 336 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pste1g00577 446 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 336 443 - -
Pste1g00577 446 SUPERFAMILY Pseudouridine synthase 138 405 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00577 Pste-Chr1 1869463 1874993 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00577 1 1869463 1874993 Pste1g00577 1 1869463 1874993 ECH