Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00546 ATGGATTTGAGACACCCTTTAGTTCTTCTTCTCTCCATTTTCCTTCTGCTTCCTTCTTTGATCTCATCTCAAGTTTGCCAGAGAAACTGTGGCAAAGAAACTCTTAAGTACCCTTTTGGAGGTGGCCCTGGTTGTGGTGATCCTCGCTTTCAACCACATGTCACATGTAGCCAAGAAAAGCTCACCTTCACTACTCACACAGGGTCCTACCCTGTTACCTCAATTGACTATACCAACCAAGTCATATACATCTCAGATCCCACCATGTCAACATGCTCTTGCACTGTCCCTAGCAAAGGCTTTGGCTTAAATTGGGATGCCCCTTTTACTTTTGCTGATAGCACCATCTTCGCTCTAGTAGATTGTTCAATGAACTCATCATCTATATGCCAATCAAACAGCTACAACGATGGGAGCAGTTCTAAGCTTCTGTGTGATCAAGCAACACCAATTTGCGGTCTTCTATACTCATGCAGGCCTATTAGCACCATCAATCTCCCAATCTCCACATGTTGTGTTTACACACCAGTTAATCTTGGACCATCGTTTGAAATGGATCTGCAGAAGCTGCAATGCCCTTCTTACACGGGGTTCTACAACTTCAATGATCAACAAACGGATCCTGAAAAGTGGAACTATGGAATAGCACTCAAGTACAAGTTCAGTGTCACAAATGACTATCCTGGCTCATGTGATGCTTGCGAAAGGAGCCATGGAGTGTGTGGGGATTGCATGGCTGATCTATCCTCTGGCATGTTCTCTCGTTTGGTTATTCTTGTAAGTTATCTTGGATGGAACTTCAACCATCAAGTAACAAACAAAATATTTCCGAAGGGTTTCACTAGTTTGAGTGTTGGAAGCTTTCATGGTAGTGGGGTGACTTAATTTCTTGGTTAAAAGAACTTGGTCATTCATTTGTGTTCTTCGGTATCAGATTTGTCATGTGTGCACATGCAATCTGTAATTGAATCTCCTCTCAGTTCATTTATGTTCAGAATTCAGTGAATGCCAAAAAAAAAAATTATTTTGTGGAATTTCTAGTAGATTTGCCTGCGTGTTAATTACCATAGTTCAAGAGGTAAAGAGTTTGATTCCCCTTGGTATGATTTCCAGTCTAAGTATGTGTCAAACGTAAAAAGTAGACATTAGTTACTCTTCCTCTCTAACTGGGTCTATATTAGTCAGAGCCTAATTTGACTTCTACAGTTCTACATGTTGAGAGTGATAGAAAAACCAAAAATAGATTGTC 1249 0.4067 MDLRHPLVLLLSIFLLLPSLISSQVCQRNCGKETLKYPFGGGPGCGDPRFQPHVTCSQEKLTFTTHTGSYPVTSIDYTNQVIYISDPTMSTCSCTVPSKGFGLNWDAPFTFADSTIFALVDCSMNSSSICQSNSYNDGSSSKLLCDQATPICGLLYSCRPISTINLPISTCCVYTPVNLGPSFEMDLQKLQCPSYTGFYNFNDQQTDPEKWNYGIALKYKFSVTNDYPGSCDACERSHGVCGDCMADLSSGMFSRLVILVSYLGWNFNHQVTNKIFPKGFTSLSVGSFHGSGVT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00546 294 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 8 243 - -
Pste1g00546 294 Pfam Wall-associated receptor kinase galacturonan-binding 26 86 IPR025287 GO:0030247
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00546 29 123 Receptor kinase-like Gene Family AT5G02070 34.000 1.80e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00546 1 1757465 1759149 Pste1g00546 1 1757465 1759149 ECH