Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00527 GTTGATCGTGGAAAAAGACAAAAAAGAAAAGGCATAAAAATTGGGAAGTCGACGCCATGGGAGTATATAAAAGAAAGAGAGAAGAGAAGAGGAGTGCAAGCGAGATTGCGGTGACCTGAGAGGATGGGTACAGAAGCAGAGGCAAATGGCGGCAAAAAGCAATTGAAATTTGTGATCTACGGTAGAACCGGTTGGATCGGTGGTTTATTGGGTAAAGTGTGCGACGAGGAAGGCATCGAATATGAGTACGGGAGGGGCAGATTGGAGAACCGGTTGTCCTTGGAAGCCGACATAAAGGCGATGAAGCCGAGCCACGTGTTGAACGCGGCGGGAGTGACCGGCAGACCCAATGTGGACTGGTGCGAATCTCACAAAGTTGAAACCATCCGAACCAACGTTGTGGGCACTCTCACCCTGGCCGACGTGTGCCGAGAAAGAGCTCTCATCCTCATCAACTTCGCCACCGGCTGCATCTTCGAGTACGACTCTTCCCACACTCTGGGTTCCGGCTTCGGCTTCAAAGAACACGACACTCCCAATTTCACCGGATCCTTCTACTCCAAGACAAAGGCCATGGTGGAGGATCTTCTTGCGAACTACGAGAACGTGTGCACGTTGCGCGTGAGGATGCCGATTTCCTCGGATTTGTCGAACCCGCGGAATTTCATAACGAAGATAACTCGATACGATAAGGTTGTGGACATCCCGAACTCGATGAGCGTACTGGACGAGCTGCTCCCAATCTCGGTAGAGATGGCGAAGAGGAATCTGACCGGGATCTGGAATTTCACCAACCCTGGAGTGGTAAGCCACAACGAGATTTTAGAGATGTATAAGGAATATGTGGATCCCAGCTTCAGCTGGAACAACTTCACTGTGGAGGAGCAGGCTAAGGTCATTGTTGCCCCTAGAAGCAACAACGAGCTTGACGCCTCTAAGTTGAACAAGGAGTTTCCTCAACTTCTCTCCATCAAGGACTCGCTTCTTAAATGGACCAAAAACCACTGCAAGCGCAACCACTCTGACCACGACATCGACCCCGACTCCAATCACTATGACCACCAATTATCAATCCCTAACTCCCAATCCCCCAACCCTTCCATCCAAATCGAGCTTGTCTCATGCGATGCCGTGCAGATTTCGCACTTCTCACCAATGATCAAGCGTGCCATCACCCACCCCATGCTTCAGTGGAGAAGGTCACTCACCGCGGGCAACCAACGTTCTGGCTCTCGAGAATGTTTCCCATAGCCAGCTCTAGACGTTGTTGGCGGTGTTTGCAAACTACCTCACCAGCAACGAGACCTTCGTCATCACTCCGCCGCTGATTTCGAAAGGCTCTGACGTCATTAAGCGGTTTGGGAGTAGGGTTCTTATAGTTCCTATGCATTCAGATTCTTCACACTCTTGAATTTAAACTTTCTTTTTCTTTTTCACACTCTTGAATTTAAACTTTCTTTTTCTTTTT 1468 0.4946 MGTEAEANGGKKQLKFVIYGRTGWIGGLLGKVCDEEGIEYEYGRGRLENRLSLEADIKAMKPSHVLNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERALILINFATGCIFEYDSSHTLGSGFGFKEHDTPNFTGSFYSKTKAMVEDLLANYENVCTLRVRMPISSDLSNPRNFITKITRYDKVVDIPNSMSVLDELLPISVEMAKRNLTGIWNFTNPGVVSHNEILEMYKEYVDPSFSWNNFTVEEQAKVIVAPRSNNELDASKLNKEFPQLLSIKDSLLKWTKNHCKRNHSDHDIDPDSNHYDHQLSIPNSQSPNPSIQIELVSCDAVQISHFSPMIKRAITHPMLQWRRSLTAGNQRSGSRECFP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00527 375 CDD dTDP_HR_like_SDR_e 15 287 - -
Pste1g00527 375 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 5 301 - -
Pste1g00527 375 Gene3D - 5 301 - -
Pste1g00527 375 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 13 289 IPR005913 -
Pste1g00527 375 MobiDBLite consensus disorder prediction 299 322 - -
Pste1g00527 375 Pfam RmlD substrate binding domain 16 187 IPR029903 -
Pste1g00527 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 293 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00527 Pste-Chr1 1698785 1702601 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00527 1 1698785 1702601 Pste1g00527 1 1698785 1702601 ECH
Pste6g01698 6 7551154 7552459 Pste1g00527 1 1698785 1702601 PCT