Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00498 GTCTCAACGTTAAATTTGGCCCACACCCTTATCATTATCATATCAATTTTGGGTGGCTCAATCTTACCCCCTTCTTGGTTGTTGCAACTTCAAAAATCTATAACAGTTATTCTACTTTCTACAATATGATAGTGTCATTGTGACACAAAACAGCTACAGAGTTTTGGCTTATTTGTTTTTATATACCCCATACAATTCTCTATTCTGTTACACATTTCCTTTATATATTTGCCACTCTTTCTGTGAGGCTCTCCACAGAAAGAAAGACACAATGGGCATAACAAGTACTTGTCTTCTTCTATACTTGTTTCTTATTCTTTCACTCTTTGCGGGTGAAATCTATGGAAATAGACAAGTTGAGGCTCTTAACAAATTGCACAAGTCCAAGTTGAGAGGCAATTTTCAAACTGATGAGAATGAGTTTGAAGTGGAGGAGGTTGTTTACGATGGCATTGTTGATTCTCAAGAGGGTATCAAAGAGAAAGATAGAATCGAGAGGCTTCCAGGACAGCCCCCAGTTACCTTTTCTCAGTATGGAGGGTATGTCACTGTGGATAAATTGGCTGGTCGTGCCTTCTATTATTACTTTGTTGAAGCTCAGCGTTCTAGTTCTAAACACAAACTCCCACTTCTTCTTTGGCTCAATGGAGGTCCAGGATGTTCATCTGTTGCCTATGGAGCAATGCAAGAACTTGGACCGTTTCGAGTAAACAGTGATGGCAAAACTCTACACAGAAATATATATTCATGGAACAGAGTTGCCAATGTTTTATTCCTCGAGTCACCTGCTGGAGTAGGATTTTCCTATTCAAACAAATCAAAAGATTACGATACCAATGGAGATAAGAAAACAGCTGCAGATAATTATTTATTCTTGGTGAATTGGTTGGAGAGGTTTCCAGAATATAAGGACAGAGATTTCTTTGTTGCTGGGGAAAGCTATGCTGGGCATTATGTGCCTCAACTTGCACACACCATTCTTTATCATAACAAAAAGGAAAATAAGAAAATCATCAACCTCAAAGGAATATTGGTATGTGGTTTCCTTCTTCTTGATGTGATTAGTGTGGTCCCTTTAGGCCCATCCCAGTATGGGTTGGACAGGCTGATTGGGAATGCAGTGATAAACGAGGAGACAGACACGGTAGGACTGTATGATTATCTTGCGAGCCATGCAATAATATCAGACAAAGCAGCGTATACGAACAAAGCATGCGATTTATCGTCTTCCAAGATTAAGGAAAGTGAGTGCAATGCAGCCGAAGAAGAAATAAGAGAGGATATAGAATACATTGATTTATACAATATATATGCTCCAGTATGCAAGAGTGACAAACTGACGGGCCAGCCCAAAAAGGCCTCTATAGTGACGGATCCATGTAGTGAGATTTATGTGCATGCATATATGAATAGAAAAGAAGTTCAAGAGGCTCTGCATGCGAATGTGACGAACCTGAAACATGACTGGGAGCCCTGCAGCGACGTCATTACAAAGTGGGTGGATAGCGCCTCAACAGTCCTTCCCCTTTTGCATAAATTCCTAAACAGTAGCCTCAGGGTTTGGATATTCAGTGGAGACACAGATGGAAGGGTGCCCATAACTTCAACAAAGTATTCAATAAAGAAGATGGACCTTCCGATCCGAAGTGTTTGGCGGCCTTGGCTTTCGCATGGAGAGGTCGGAGGGTATGTGGAAGTATACAAGGGAGGGCTCACATTAGCGACGGTGAGGGAAGCAGGGCATCAAGTGCCAAGTTATCAACCGGCAAGGGCCCTCACTCTGCTCAAATATTTCATAGACGGAATTCCTCTTCCTCTTCCCAAAACAAATCCCTAATCTCATTATCACCATTCCCCTCAAACAAAAACATCAAATACCATGATCTTCTTCCTCTACACTCATTATAATGTACCTACCACACCTTTCCTACTCAAATCAATTCTCACAACCCTCTTCCCTCTTATTTATGTCTATCTTTATGTGCCTCACGCCTCCCACTCATTTGTCAAACTAATGAATTGGTTTTCCAAAATCCTGTAATCTTTATTATTCTTAAACTTTTGCCTACGACAATAATCACGCCGATCATCACACCCCCATATCATTTTTATTCAAACGTTTCGAATAACTACAACATTATTTCATGTATCATATTATCATCATAATTTGAACTTGCTCGTCATGCTTATACATCC 2196 0.4039 MGITSTCLLLYLFLILSLFAGEIYGNRQVEALNKLHKSKLRGNFQTDENEFEVEEVVYDGIVDSQEGIKEKDRIERLPGQPPVTFSQYGGYVTVDKLAGRAFYYYFVEAQRSSSKHKLPLLLWLNGGPGCSSVAYGAMQELGPFRVNSDGKTLHRNIYSWNRVANVLFLESPAGVGFSYSNKSKDYDTNGDKKTAADNYLFLVNWLERFPEYKDRDFFVAGESYAGHYVPQLAHTILYHNKKENKKIINLKGILVCGFLLLDVISVVPLGPSQYGLDRLIGNAVINEETDTVGLYDYLASHAIISDKAAYTNKACDLSSSKIKESECNAAEEEIREDIEYIDLYNIYAPVCKSDKLTGQPKKASIVTDPCSEIYVHAYMNRKEVQEALHANVTNLKHDWEPCSDVITKWVDSASTVLPLLHKFLNSSLRVWIFSGDTDGRVPITSTKYSIKKMDLPIRSVWRPWLSHGEVGGYVEVYKGGLTLATVREAGHQVPSYQPARALTLLKYFIDGIPLPLPKTNP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00498 521 FunFam Carboxypeptidase 68 266 - -
Pste1g00498 521 FunFam Carboxypeptidase 416 511 - -
Pste1g00498 521 Gene3D - 370 407 - -
Pste1g00498 521 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 73 498 IPR001563 GO:0004185|GO:0006508
Pste1g00498 521 Gene3D - 416 511 - -
Pste1g00498 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 481 494 IPR001563 GO:0004185|GO:0006508
Pste1g00498 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Pste1g00498 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Pste1g00498 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Pste1g00498 521 Pfam Serine carboxypeptidase 279 511 IPR001563 GO:0004185|GO:0006508
Pste1g00498 521 Pfam Serine carboxypeptidase 79 255 IPR001563 GO:0004185|GO:0006508
Pste1g00498 521 Gene3D alpha/beta hydrolase 68 353 IPR029058 -
Pste1g00498 521 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Pste1g00498 521 SUPERFAMILY alpha/beta-Hydrolases 71 515 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00498 Pste-Chr1 1607776 1612291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00498 378 514 Calmodulin-binding Proteins AT2G22960 30.657 2.26e-15 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00498 1 1607776 1612291 Pste1g00498 1 1607776 1612291 ECH