Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00480 AGGGCAGGAGTGGGAGTGGGTATATCTTATCCCTTGAGTGAGATGAAGAGGATTGAATTGTGGTATGTGGTAACCTAAGGTTGAAGCAAGCATGGGTTCCTGTTCCTATGCAGCAACGCATCCTTCCCTTATGCTGGGTCACTCTGACGTCTTTCCTTCTATTCGCTCCTCTCTCACTCCCATCCTCTACCCTCCTCTCCTTTTGAAGCCTTCCAAATGGATTCAACTTCATCTCCAACTCAAATCCAGGTCTTGTCACGCCCTCGTCGCCGCTTTGGCTGCCGAGGTCCAGCTCCCCGAAACTATTGATGACGATGACGATGACGATGATCGTGATGCCGCCGCCACCGCCACCAAGCCCAAGCAAGGCAAGCCTGCTTTGCTTCTCAAGAGGGATAGGACTAGGTCTAAGAGGTTCTTGGAAATTCAAAAGTTGAGGGAGCGTAAGAAAGACTATGACTTGAAGACAGCAATATCTTTGGTCAAACAAACTGCTAAGACCAAATTTGTAGAAACTGTCGAAGCCCATTTCCGCCTTAACATTGACCCTAAATATAATGATCAACAGCTGAGAGCAACTGTTAATCTGCCCAAGGGAACCGGAAAGCCCATTAAAGTCGCTGTTCTTACTCAAGAAACAACCGCCAGCCATGTCCCAATGGTTGGGGTTGGTTACATGAATCAACTCATTTTGATAGGTGAAAAATTCGATGAAGCAAAAAATGCAGGAGCTGATTTGGTGGGTGGAGAGGATCTAATAGAACAAATAAAAGGAGGATTCATGGAGTTTGATAAACTAATTGCTTCTCCAGATATGATGCCTAAGGTTGCTAGCCTAGGGAAAATTCTGGGGCCAAGAGGACTGATGCCAAACCCAAAAGCTGGCACTGTAACACCTAATATTCCTCAGGCTATAGCAGAATTCAAGCAGGGAAAAGTTGAATACAGGGCAGACAAAACTGGAATCGTGCACTTACCTTTTGGGAAAGCTGACTTTCCTGAAGAGGATCTTCTTCTGAACTTGCTTGCCGCAGTAAAATCAGTAGAGGCAAACAAACCTTCGGGTGCTAAAGGTGTGTATTGGAAAAGTGCCCACATATGCTCAGCAATGGGGCCATCAATCAGGTTGAATATCAGGGAGATGCTTGATTACAGACTTCCATCAGAGTAGAACCTTCAACTGTAAATGCTCATTTGGATTCAGTAAGCTATCCTGGGTGCCATTGTGAGATCTTGCCAGATATTTAGTCAAAGATGTTACCGAAGTTACATACGATGAACAGGGGATATGATACATTGGTGCTTATATCTCTGTTCCAAATGTTTGCACACACTACATTACATAATCTTTGACCCGGCTGAGGATTTTCCTTGTATTACTTTGTAACTAACACCAGATGTCTAATGATATTTTATTTCGTGGGAATAAATTTTCATTTTACGTTTGATTATTAGGTATTCCATTCTTCAATAGCCTGTGTTCGTTGTACTTATTACAATTGGCATGGTACTATGGTTCGAAATGATGCCTGCTATTAGAAAACATTGAACTCATTTAATACCTGTAGTATTATAACACGATAAACAAGTATGTTTTTAATATTCTACTATTTAATAAATAACATGCCTCTTT 1633 0.4231 MGSCSYAATHPSLMLGHSDVFPSIRSSLTPILYPPLLLKPSKWIQLHLQLKSRSCHALVAALAAEVQLPETIDDDDDDDDRDAAATATKPKQGKPALLLKRDRTRSKRFLEIQKLRERKKDYDLKTAISLVKQTAKTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTGKPIKVAVLTQETTASHVPMVGVGYMNQLILIGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLLNLLAAVKSVEANKPSGAKGVYWKSAHICSAMGPSIRLNIREMLDYRLPSE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00480 359 SUPERFAMILY Ribosomal protein L1 108 348 IPR023674 -
Pste1g00480 359 Gene3D - 119 200 - -
Pste1g00480 359 MobiDBLite consensus disorder prediction 71 96 - -
Pste1g00480 359 Pfam Ribosomal protein L1p/L10e family 132 342 IPR028364 -
Pste1g00480 359 Gene3D - 201 278 IPR016095 -
Pste1g00480 359 FunFam 50S ribosomal protein L1 197 281 - -
Pste1g00480 359 Hamap 50S ribosomal protein L1 [rplA]. 100 351 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Pste1g00480 359 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 84 355 - -
Pste1g00480 359 CDD Ribosomal_L1 124 346 IPR028364 -
Pste1g00480 359 ProSitePatterns Ribosomal protein L1 signature. 243 261 IPR023673 -
Pste1g00480 359 Gene3D - 279 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00480 Pste-Chr1 1565024 1569790 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00480 1 1565024 1569790 Pste1g00480 1 1565024 1569790 ECH