Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00414 GTGATAATGCTGGTAGGAAGTCACTGCTACTAATCCAATGACATAGCATCCACCTACTATGGTGCTCCAATATTCCCCACAGCATAGACCCTCACACGACAATCACGTGAACTCTGTTGAGGTTCCCACTTCCCATTTCCCATCTTGCATACCGCACAGACATTCACATACCGACGCAATGGCACTTATCGTAATTCCCAAGAAACGAGAGGGCGAAGAGTAAAAATTCAATTTCCGTTACCTTTTTTCTCCCAATTCCAAAACTATATCCCGCGTTGCGAACAAGCCAGGTAGCTAGAAAAAGCGTGAAAAGTGCGGTCTCTCACCGCACGCATTAGCACTGTCTCACTCACTAACGCTACGCACCCGTTATCATCTCAACTTGTTCTCGGATCTAACTACCTTCTCGCTATGAATCGCCACCACGATCCCAATCCATTCGAGGAAGAAGAAGTCAATCCTTTCTCGAATGGCACTGCTGTTCCTGCATCAAAATCACGTATTCCACCATTAGCATCTGAGCCACTGGGCTTTGGTCAAAGACATGATGCTACAGTCGATATTCCTTTGGATGCTACAAACGACTCCAAGAAAAAAGGTCAAGAGCTAGCTGCTTGGGAAGCAGATTTAAAACGGAGAGAGAAGGAAATAAAAAAAAGAGAAGAGGCTGTTGCTAGAGCTGGTGTTCCTGTTGATGATAAGAATTGGCCTCCATTTTTCCCTATCATTCACCATGATATTGCCAATGAGATACCAGTTCATGCTCAGAGGCTGCAGTATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTATGCCTAGTTTTCAATGTAGTTGCTGTGACTGTCTGTTGGATCAGAGGCGGCGGTGTTAAAATTTTTTTCCTTGCGGTGATTTATGCTCTACTTGGTGTTCCTCTTTCATATGTTCTTTGGTATAGGCCCCTCTATCGAGCTATGAGGACGGACAGTGCTCTGAAGTTTGGTTGGTTTTTCATGTTATACTTGCTTCATATTGCATTTTGCATCTTTGCTGCAATTGCGCCTCCAGTTGTTTTTCATGGAAAATCATTAACGGGCATCCTTGCTGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGGTTGGGTTTGGCATGTTTTGCTTGGAGGCTCTCCTAAGCTTATGGGTACTTCAGAAAATATACATGTATTTCCGGGGGCACAAGTGAGACTTCTCAGGATTTTGATCCGACGGCTTTTATAATGTCAGTCACTTCTCAGTGTGACATCATATTCTTTTGCCCATCCTCATTTTTCTCATAGAATATCTTTGTGTGATATTGATTGTGTTTTTTGTAGTTACTGTAACAGGGTTTAGTTTGTACAATACTGTAATGAATTCTGTGAAGTTCAGTAGCTCTACTAGTGTGTTTCCTCTAGTGAAAAGAAAATTTGCTTTCGATAAGCAGATATGTAATGGATGTTCAGTGAAGTATTGTTGTAGCGTTATTGCAGATATGATGCGCCTCAAAAGTAAAAATCTACACCTCCCAACAAACACTTGCACACACCCAACTGTGTGAGACTTTAATT 1585 0.4215 MNRHHDPNPFEEEEVNPFSNGTAVPASKSRIPPLASEPLGFGQRHDATVDIPLDATNDSKKKGQELAAWEADLKRREKEIKKREEAVARAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVTVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMLYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFGMFCLEALLSLWVLQKIYMYFRGHK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00414 269 Coils Coil 66 86 - -
Pste1g00414 269 Pfam SCAMP family 97 267 IPR007273 GO:0015031|GO:0016020
Pste1g00414 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 268 IPR007273 GO:0015031|GO:0016020
Pste1g00414 269 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00414 Pste-Chr1 1390137 1401424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00414 1 269 Miscellaneous Gene Families AT1G32050 74.539 4.79e-153 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00414 1 1390137 1401424 Pste1g00414 1 1390137 1401424 ECH