Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g00397 | GCGACGCTAGTTACAGCACTCCCCCCTCAAATCCTACCCCCCTTTTTATTATTTTTCTTTTATTTTGAATTTAAAATTTCAATTCTCCATTTTTATTTATAAAAATAAAAAAGAGAAGTAATTTTAGTAGGGGGAGCGATCCCCTAAACACGAAAAAATTGAAATCTAAATCTACAACATCACAACACAAAATGGCATTTCACGTAGCTTGTCCAATTACATGTCGGCGAATCTGTTTCTGCTCGCTAGGGTTTCCGCGCGCTCTCCAGGCCGCTCCCGACGCAGCGAATGGCTTGGTTCACGACGTTGCCGCGCTCCGCGAGTTCCTGGCCGACACGCGCAGGGACGACGCCACCGTCCAGGTCCCCGTCCCCAAGGTTGTCCCGCCGCCTCCCCCTCCCCCCGACAGTCTTCCTCTTGGCCCCGACGCCCTCGATGAGTCCGCCTCCATGAAGGCCAAGCGCATCGCACTCCAGCGTAAGGGCGCCGCCGCCATGATCGCCGCCGAGGAGTACGCTCGCCGCTTCGAGTCCGGCGATGTCCTGAATACTCCCGGGAATCTTACTGGAGAGGAGCAGGGTCAAACCAATAGGAGCTATTGTCGAATTTGCAAGTGTGGAGAAAATGAGGGAAGTGAGAAGGCTCAGAAGATGCTATCTTGCAAAAGTTGTGGTAAGAAGTACCACCGGAACTGCTTGAGAAGTTGGGGTCGACATAGAGATTTATTTCATTGGAGTTCATGGACCTGTCCTCTTTGCCGAATTTGTGAGGCTTGCAGAAGGACTGGTGATCCAAGTAAGTTCATGTTTTGCAAAAGATGTGATGGTGCTTATCACTGTTATTGTCTGCAACCTCCTCACAAGAGTGTTTGTAATGGGCCCTATTTGTGCACAAAACACGCAAGGTGTCACAGCTGTGGATCCAATGTCCCTGGAAATGGACTAAGTGTGAGGTGGTTTATGGCATACACCAACTGTGATGCATGTGGAAGATTGTTTACAAAAGGGAACTACTGTCCTGTTTGTTTGAAGGTTTACAGAGATTCAGAATCAACACCTATGGTTTGTTGTGATACTTGCCAGCTCTGGGTACATTGCCAGTGTGATAATATCAGTGATGAAAAATATCACCATTTTCAAGTGGATGGGAATTTGCAGTATAAATGTCCCACGTGCCGTGGGGAATGTTATCAGGTCAAGAATCCTGAAGATGCTGCACAAGAGATTTGGAGGAGAAGAAATATTGCTGAGAGAGATTTGATTGCTAGCTTGAGGGCTGCAGCTGGTTTGCCAACTCAAGAAGAGATATTTTCTATTTCACCATTTTCAGATGATGAGGATAGTGGGCCTTTAAAATTAAAGAGTGAATCTGCCCGATCCTTTAAGTTCTCTCTAAAGAATTTGTCCCATGACTCACCAAAGAAGAAATCTTCAAGCAAAAAGTCTGTTAAGAAAAAAGACTCCCACTCATTTATGGCTAGTAAAATTGACACATACAATAGTTTTGAAGGACATAGTGATATTAAATCTTTGCATAGCTTAGATGATGATAAGAATGATGATATACAATCCCAAAGAAATGAAGGTCCTGATATTTACTCATCACCTGCGACTGGAAGCTTGAGTCAAACCGAAGCATCTGGTCCTATTAATCAGTCAGGGGTTTTGAAACATAAGTTTGTTGATGAGGTGATGGTCAGTGATGAAGAGAGGAAACCTAGAGTTGTTCGAATTAAAAGCAACAAGGCACACATTCTTGATAGTGAAGAGGAAAGTGGAAAACAGAGTGTTACTACTCAGAATGTGAAAGGGAAGAAGCTGGTTATAAATTTGGGAGCACGGAAAATCAATGTGGCTAGTTCCCCACGGTCTGATACTTCAAGCTGCCAAAAAGATCAAGATCTGGTCACGGTTAATGGAAAGGAAGATATAAACCTATGGAGGAAGGGAGACAAGTTTGCGTCAGATAGACAAGATGATGCAGCTAGGCATAGTGATGGTAAAGGAAACAGAGTTGATTCTGGGCAATCAAAAATTTTCAAGGTTTCAGGAAGAGAAGGAAATTTGATTAAGCTGGGAAAAGTTAAGCCAGATGTTTCTGAATTCAACCTGACGTCTGGTAGAGGCAATACGTCTGATGGGCGGATAAAACATAATATTGATGGAATAATTAATCAGGTTGAAATAAAAGCCACATCAAGAGGCGAAAGGACATATTTGGGGAAGCAGTCAGAAGGCAGCTCTGATGCGTATGAGACAGATGACAATAGTAATCGTACACCCTCACATTCCTTGCCAAAAGATTCCAAACCTTTACTAAGATTTAAATTCAAGAAACCCAGCATTGATAGTCAAAATTCTCCACATCGGGAGGAGGAGAAGACAACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGACCATCACCTTTCAAGGAGAAAACACCATTTAATGAGTCAGAAAGTGTAAGTCAACCACATCAAAACAGTGTAATGGATGAGATCATGGATGCAAACTGGATATTGATGAAATTGGGCAATGATGCAATTGGAAAGAGAGTTGAAGTTCACCAAACATCTGACAATTCTTGGCATAAGGGAGTGGTTACTGACATAGTTGAAGGCACTTCAAAATTATATGTTGCATTAGACGATGGGAAGTTGAAGACCTTGGAACTCAGGAAACAGGGGGTCCGTTTTGTTCCTCAAAAGCAGAAGAGATCGAAGACATGAACTAAGTTTGTTTGCCCTTAGTGATCATTTAATGTGGAGCTTTTCTTAATAGACTTCGAAGATTGTTTCATCTTTGAGGCCTCTTACTGAATCTATATTCGAATCCGCTCGCATTGCCGCTGATTTTTGGTGAGGCATTCATTCAAGGTTGGAGAAAATTTCAGTTTTCTTGAAAGAATTAACCATTTACCTCAGTCCTTTTTCTGGGCTACCGGTTGATTGCAAGTTAGATTTTTCTTGCTTTTCTTCATGTATCTGATTTAAAAGTAGATTCTACCTGTGATATATAGGTCACCATTTCTGTAGAATAGTAGAGAAGTAAAAGCCAAGGTGTTAGCTGTAAGGTTAATGTTGCTTGTAGTTTTGTGAATTCTTGGTTCTATGAATTGAGATATTTGTCTTGAAAGAAATTATTGTCGTTTTGTTAAAGTAG | 3162 | 0.4219 | MAFHVACPITCRRICFCSLGFPRALQAAPDAANGLVHDVAALREFLADTRRDDATVQVPVPKVVPPPPPPPDSLPLGPDALDESASMKAKRIALQRKGAAAMIAAEEYARRFESGDVLNTPGNLTGEEQGQTNRSYCRICKCGENEGSEKAQKMLSCKSCGKKYHRNCLRSWGRHRDLFHWSSWTCPLCRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKSVCNGPYLCTKHARCHSCGSNVPGNGLSVRWFMAYTNCDACGRLFTKGNYCPVCLKVYRDSESTPMVCCDTCQLWVHCQCDNISDEKYHHFQVDGNLQYKCPTCRGECYQVKNPEDAAQEIWRRRNIAERDLIASLRAAAGLPTQEEIFSISPFSDDEDSGPLKLKSESARSFKFSLKNLSHDSPKKKSSSKKSVKKKDSHSFMASKIDTYNSFEGHSDIKSLHSLDDDKNDDIQSQRNEGPDIYSSPATGSLSQTEASGPINQSGVLKHKFVDEVMVSDEERKPRVVRIKSNKAHILDSEEESGKQSVTTQNVKGKKLVINLGARKINVASSPRSDTSSCQKDQDLVTVNGKEDINLWRKGDKFASDRQDDAARHSDGKGNRVDSGQSKIFKVSGREGNLIKLGKVKPDVSEFNLTSGRGNTSDGRIKHNIDGIINQVEIKATSRGERTYLGKQSEGSSDAYETDDNSNRTPSHSLPKDSKPLLRFKFKKPSIDSQNSPHREEEKTTIKGQRSKRKRPSPFKEKTPFNESESVSQPHQNSVMDEIMDANWILMKLGNDAIGKRVEVHQTSDNSWHKGVVTDIVEGTSKLYVALDDGKLKTLELRKQGVRFVPQKQKRSKT | 845 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g00397 | 845 | SUPERFAMILY | FYVE/PHD zinc finger | 181 | 242 | IPR011011 | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 671 | 765 | - | - | |
| Pste1g00397 | 845 | ProSiteProfiles | Zinc finger RING-type profile. | 137 | 190 | IPR001841 | - | |
| Pste1g00397 | 845 | CDD | RING-H2 | 137 | 190 | - | - | |
| Pste1g00397 | 845 | SUPERFAMILY | FYVE/PHD zinc finger | 127 | 190 | IPR011011 | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 404 | 425 | - | - | |
| Pste1g00397 | 845 | PANTHER | HL01030P-RELATED | 122 | 483 | - | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 56 | 81 | - | - | |
| Pste1g00397 | 845 | SMART | PHD_3 | 191 | 237 | IPR001965 | - | |
| Pste1g00397 | 845 | SMART | PHD_3 | 274 | 329 | IPR001965 | - | |
| Pste1g00397 | 845 | SMART | PHD_3 | 139 | 190 | IPR001965 | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 705 | 735 | - | - | |
| Pste1g00397 | 845 | ProSitePatterns | RecR protein signature. | 262 | 284 | IPR015967 | GO:0006281|GO:0006310|GO:0046872 | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 446 | 490 | - | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 60 | 76 | - | - | |
| Pste1g00397 | 845 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 269 | 331 | IPR013083 | - | |
| Pste1g00397 | 845 | SMART | ring_2 | 275 | 328 | IPR001841 | - | |
| Pste1g00397 | 845 | SMART | ring_2 | 137 | 189 | IPR001841 | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 588 | 616 | - | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 750 | 765 | - | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 518 | 538 | - | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 588 | 607 | - | - | |
| Pste1g00397 | 845 | ProSiteProfiles | Zinc finger PHD-type profile. | 272 | 331 | IPR019787 | - | |
| Pste1g00397 | 845 | FunFam | PHD finger family protein | 269 | 331 | - | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 446 | 461 | - | - | |
| Pste1g00397 | 845 | SUPERFAMILY | FYVE/PHD zinc finger | 271 | 330 | IPR011011 | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 673 | 701 | - | - | |
| Pste1g00397 | 845 | ProSitePatterns | Zinc finger PHD-type signature. | 137 | 189 | IPR019786 | - | |
| Pste1g00397 | 845 | MobiDBLite | consensus disorder prediction | 462 | 487 | - | - | |
| Pste1g00397 | 845 | ProSiteProfiles | Zinc finger PHD-type profile. | 134 | 192 | IPR019787 | - | |
| Pste1g00397 | 845 | FunFam | PHD finger family protein | 131 | 246 | - | - | |
| Pste1g00397 | 845 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 129 | 246 | IPR013083 | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste1g00397 | 1 | 1350194 | 1356949 | Pste1g00397 | 1 | 1350194 | 1356949 | ECH |