Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00367 GAATTGGGGTGATGGAAGCGAAAGCCTCTCCCGCCATGGCCATCAAGACACAACTCCTCATCCTCTCACTAACACAGGTTTACCCTTCTCTCACATTTGTTCCAGCAACAACAAAAACCACCACTCTTCCACTCTCTCCCCTTCGCCCTACATCCCTTCCTCTTCCCCTCAGATTCCCACCCTCCTTCTCCTTCAAGTCCCCAACCTCAACACTCAGCGCCTTCTCCGAGGCCGACGAAGACGACGAACTAGAAGACGACTACGACGACGAAGACGATGACCAAGACCACGACATCGCTGCCGACGAATACGACGACGTCTCCGACGGAGACCCCGCCGTGTTCGCTCGCCACCACGGATTCAAGTGGCAGAGAGTCGAGAACCTCTTCATCCAACTTAGGGAGTTCGGCGCCGGTATCATCGATGTCGACGAGCTCGCTTCCGTCTACGATTTCCGCATCGACAAGTTTCAGCGGCAGGCGATACTGGCGTTTCTGAGAGGCTCCTCGGTGGTGGTTTCCGCTCCGACTAGCAGCGGGAAGACGCTTATTGCGGAAGTCGCGGCGGTGGCCACGGTGGCTAGGGGACGCCGAATTTTCTACACGACGCCGCTTAAGGCGTTGTCCAATCAGAAGTTTCGTGAGTTCCGCGAGACTTTTGGTGACAGTCATGTTGGCCTTGTTACGGGTGATTCTGCCGTGAACAAGGATGCTCCGGTTTTGATTATGACCACAGAGATATTGCGCAACATGTTGTATCAGAGTGTTGGTAATGTTTCTTCTGGAAGTGGACTTGTAAATGTTGATGTGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGCGGTACAGTCTGGGAGGAGATTGTTATTTATTGTCCTAAAGAAGTTCAACTTATTTGCCTGTCAGCAACTGTTGCAAATCCAGATGAGTTGGCTGGATGGATTGGTCAGATTCATGGTGAAACAGAATTGGTAACATCATCAAAGCGACCAGTTCCATTGACTTGGCATTTCTCTCTGAAGCATTCCTTATTACCACTTCTTAATGAGAAAGGAACACACATGAACAGGAAGCTGTCACTCAATTATTTACAACTTCAAGCTGCAGAGGCTAAACATTATAAGGATGATTGGTCTAGGAAAAGGAACTCCCGCAAACGAGGAACTCACTCAAGCTATGATAGTGATGATAGCTTTCTTGAACAACGCTCTCTTTCAAAGAATAACATAAATGCAATTCGTCGTTCGCAAGTTCCTCAAGTACTTGATACATTATGGCAGCTTGAGTCCAGGGATATGCTGCCAGCTATTTGGTTTATTTTTAGCAGAAAGGGTTGTGATGCGGCTGTGCAATATCTTGAAAATTGCAAACTTTTAGATGAGTGTGAAACAAGTGAGGTTGAGCTAGCCTTGAAGAGGTTCCGCAAGCAGTATCCTGATGCTTTCAGAGAATCAGCTGTAAGGGGACTTTTGGAAGGGGTTGCTGCCCATCATGCTGGATGTCTACCTTTGTGGAAGGCATTCATAGAAGAGTTGTTTCAAAGAGGACTGGTCAAGGTTGTTTTTGCTACAGAAACCCTGGCTGCTGGAATCAATATGCCTGCTAGAACAGCTGTTATTTCATCTCTCAGCAAGAGAGGTGATATTGGACGTATACCATTAAGATCAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGACGCAGAGGCATTGATGAAAGTGGTCATGTAGTCCTCGTCCAAACTCCTAATGAAGGTGCGGAAGAGGGCTGCAAAGTACTGTTTGCAGGACTAGAGCCTCTAGTGTCTCAGTTTACTGCTTCTTACGGAATGGTTTTGAATCTTCTTGCTGGTGTGAAAGCTATTCATAGATCAAATGAATCAGATAACGTTAAATCTTCCACTGGGAGAACTTTGGAAGAGGCTAGGAAATTAGTTGAGCAGAGTTTTGGAAATTATGTTAGTAGCAATGTTATGCTGGCTGCTAAAGAGGAAATTAATAAGATTGAAAAAGAAATTGAGTTGCTTATGTCAGAAATTACTGACGAAGCCATAGATAGAAAAAGTAGGAAGGCTTTATCACCACGACAATACAAAGAAATTGCAGAATTACAGGAAGATTTAAGGGCAGAAAAACGTGTTCGGTCTGCATTGAGGAAACAGATGGAAGCAAAGAGAATATGTGCCCTGAAACCTTTGTTGGAGGTTCCTGAAAGTGAACATTTACCATTCTTGTGCTTGCAGTATAGAGATTCTGAAGGAGTCGAACATTCAGTTCCTGCTGTGTTTTTGGGGAAGGTTGACTCCCTTAATGCTTCAAATCTCAAAAATATGATTTCTTCTGTCGATTCTTTTGCATTGAACTTAGCAGACGCAGAGCCCAGTGTTGTTGATCCTGAATTGAATGAAGATCTTGAACCATCATATCATGTAGCTCTTGGGTCAGATAACACTTGGTATCTATTTACAGAAAAGTGGATTAAAACGGTATATGGGACAGGCTTTCCTAATGTTCCATTGGCTCAAGGGGATGCTCGACCTCGAGAAATTATGAGTATTCTCCTTGACAAGGAGGACATGAAGTGGGATCAGCTTTCTCACTCTGAGCATGGTAGTTTATGGTTCATGGAAGGATCTCTGGATACATGGTCTTGGAGCTTGAATGTTCCTGTTTTGAGTAGTTTGTCAGAAAGTGATGAGCTATTACTACTGTCTCAGGACTACAAAGATGCCATCGAACGTTACAAGGACCAAAGAAATAAAGTTTCACGCTTGAAGAAAAAGATAGCCCGTAGTGAAGGCTATAAAGAATATTTTAAAATCATAGAAGCAGTCAAGTTTACTGAGGAGAAAATCAAGCGCCTGAAAAATAGATCTAAACGTTTGATTAATCGGATAGAACAAATTGAACCCTCAGGTTGGAAGGAGTTTATGCAGGTTAGCAATGTCATACATGAAATGAGAGCTTTAGATATTAATACGCATGCGATATTTCCACTTGGTGAAACTGCTGCTGCAATTCGAGGAGAAAACGAGCTATGGCTTGCTATGGTTCTGCGCAATAAAATTTTACTAGAATTAAAACCTGCACAGCTTGCAGCGGTGTGCTCAAGTTTGGTGTCTGCGGGTATCAAAGTCCGACCCTGGAGAAATAATACTTACATTTATGAGCCTTCTGCAACTGTAAGCAAATTCATATCGTTATTAGATGATCAAAGAAACGCCTTATTGGCAATGCAGGATAAGCATGGGGTGACAATCTCTTGCTGTTTAGATAGCCAGTTTTGTGGTATGGTTGAGGCCTGGGCTTCTGGGTTGACATGGAGAGAAATAATGATGGATTGTGCAATGGATGATGGCGATTTAGCTCGTCTCCTTCGACGGACCATTGATCTGTTAGTTCAGATTCCAAAATTGCCAGATATTGATCCATTGTTGCGGCAAAATGCGAAGGCTGCTTCTGATGTCATGGATCGGCCTCCAATAAGTGAACTTGTGGGCTAATCTATGTCTCTGTTGAACATTGCGTTTGTAAATTTTGTACGATTAATTTTTAACACTATTTTTATCATATCATCTTCATCATTACTATTATTAACGAAAGCTTAGGAGAAAGGAATTTGCTGC 3635 0.4352 MEAKASPAMAIKTQLLILSLTQVYPSLTFVPATTKTTTLPLSPLRPTSLPLPLRFPPSFSFKSPTSTLSAFSEADEDDELEDDYDDEDDDQDHDIAADEYDDVSDGDPAVFARHHGFKWQRVENLFIQLREFGAGIIDVDELASVYDFRIDKFQRQAILAFLRGSSVVVSAPTSSGKTLIAEVAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDSHVGLVTGDSAVNKDAPVLIMTTEILRNMLYQSVGNVSSGSGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGETELVTSSKRPVPLTWHFSLKHSLLPLLNEKGTHMNRKLSLNYLQLQAAEAKHYKDDWSRKRNSRKRGTHSSYDSDDSFLEQRSLSKNNINAIRRSQVPQVLDTLWQLESRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECETSEVELALKRFRKQYPDAFRESAVRGLLEGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDIGRIPLRSNELLQMAGRAGRRGIDESGHVVLVQTPNEGAEEGCKVLFAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESDNVKSSTGRTLEEARKLVEQSFGNYVSSNVMLAAKEEINKIEKEIELLMSEITDEAIDRKSRKALSPRQYKEIAELQEDLRAEKRVRSALRKQMEAKRICALKPLLEVPESEHLPFLCLQYRDSEGVEHSVPAVFLGKVDSLNASNLKNMISSVDSFALNLADAEPSVVDPELNEDLEPSYHVALGSDNTWYLFTEKWIKTVYGTGFPNVPLAQGDARPREIMSILLDKEDMKWDQLSHSEHGSLWFMEGSLDTWSWSLNVPVLSSLSESDELLLLSQDYKDAIERYKDQRNKVSRLKKKIARSEGYKEYFKIIEAVKFTEEKIKRLKNRSKRLINRIEQIEPSGWKEFMQVSNVIHEMRALDINTHAIFPLGETAAAIRGENELWLAMVLRNKILLELKPAQLAAVCSSLVSAGIKVRPWRNNTYIYEPSATVSKFISLLDDQRNALLAMQDKHGVTISCCLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLVQIPKLPDIDPLLRQNAKAASDVMDRPPISELVG 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00367 1166 Pfam DSHCT (NUC185) domain 996 1161 IPR012961 -
Pste1g00367 1166 CDD SF2_C_Ski2 399 581 - -
Pste1g00367 1166 Coils Coil 700 720 - -
Pste1g00367 1166 FunFam DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 948 1158 - -
Pste1g00367 1166 SMART DSHCT_2 991 1165 IPR012961 -
Pste1g00367 1166 Gene3D - 330 598 IPR027417 -
Pste1g00367 1166 MobiDBLite consensus disorder prediction 376 395 - -
Pste1g00367 1166 Coils Coil 907 927 - -
Pste1g00367 1166 Pfam DEAD/DEAH box helicase 153 305 IPR011545 GO:0003676|GO:0005524
Pste1g00367 1166 MobiDBLite consensus disorder prediction 72 92 - -
Pste1g00367 1166 MobiDBLite consensus disorder prediction 71 92 - -
Pste1g00367 1166 Coils Coil 658 678 - -
Pste1g00367 1166 SMART helicmild6 483 569 IPR001650 -
Pste1g00367 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 583 IPR027417 -
Pste1g00367 1166 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 158 322 IPR014001 -
Pste1g00367 1166 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 95 1150 - -
Pste1g00367 1166 Coils Coil 944 964 - -
Pste1g00367 1166 Gene3D - 947 1158 - -
Pste1g00367 1166 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 416 615 IPR001650 -
Pste1g00367 1166 SMART ultradead3 146 336 IPR014001 -
Pste1g00367 1166 Gene3D - 111 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00367 Pste-Chr1 1289305 1297155 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00367 1 1289305 1297155 Pste1g00367 1 1289305 1297155 ECH