Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00220 GGAAGAGAAGAGAGTTGAGCAGACAAGTGTGAAGTGTTGGGAAGGAAGAAGAAGAAGGAGCAGATGGGTAATCCACGGAAATCGAAGACCGCCGACGAGCTTCACACGGCGGCACGGTCCGGAGATCTCATCGCCGTTCAGTCAATTTTGGCGTCAAATCCTTTGGCCGTTAATTACAGAGATAAGCATTCCCGAACACCTCTACATTTAGCAGCATTTTCTGGGCAAACAGAGGTAGTCACTTATCTCTGCAAGCACAAGGCTGATGTTGGTGCTTCTGCTATGGACGACATGGCTGCAATACACTTTGCTTCACAAAAGGGACATGGAGAAGTTGTTCGGGCTTTACTTTCGGCTGGGGCCTCTCTCAAAGCTGCCACACGCAAAGGCCTGACTTCATTACACTATGCTGTTCAAGGTTCCCATTTGGAACTCATCAAGTACTTGACCAAGAAAGGGGCAAATCTCGGTGCCAAGACAAAGGCGGGAAAGACCCCATTGGATCTTGCAACCAATGAAGAAATCTGTGCCTTTCTGGAGGAATCTGAAAGGTCTGCTAAGAATGGAGAATTGGGGAAAAAAGATAAAGATAAAGCTGAAGAATCTGATGATCCAAAGACAGCTGCTTCAGGCTCCGAAGGTGATTTTAATGCTGAACCTTCTGCAGCTGCTGCTAATGAAGAAAACGAGAGAGAGAAGAGGAAGGGTAATGAAGGTGATGCAAGGGAGGAGTCCTCACAACCAAAAAAGGCGAGAATTAAGTTAAGCCATCTCCAAAGTTCAGATGATACCCAAGAAGAGGAAGTGTAGGTTGGTATAGGCATAGTTGGACTAAAATCTTGTTACTGTAATCTGTAATATTATCTGATTTGGAACCCCTTTGTTGGGTTAGTAAACTGGACCATCTGTTTAAGTATTAAACAACAAATTATTCTAGATTAATACAAAATTATCTTGACAATTTCTCCT 969 0.4407 MGNPRKSKTADELHTAARSGDLIAVQSILASNPLAVNYRDKHSRTPLHLAAFSGQTEVVTYLCKHKADVGASAMDDMAAIHFASQKGHGEVVRALLSAGASLKAATRKGLTSLHYAVQGSHLELIKYLTKKGANLGAKTKAGKTPLDLATNEEICAFLEESERSAKNGELGKKDKDKAEESDDPKTAASGSEGDFNAEPSAAAANEENEREKRKGNEGDAREESSQPKKARIKLSHLQSSDDTQEEEV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00220 248 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Pste1g00220 248 MobiDBLite consensus disorder prediction 165 248 - -
Pste1g00220 248 MobiDBLite consensus disorder prediction 204 242 - -
Pste1g00220 248 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Pste1g00220 248 PANTHER ANKYRIN REPEAT PROTEIN 7 221 - -
Pste1g00220 248 ProSiteProfiles Ankyrin repeat region circular profile. 75 104 - -
Pste1g00220 248 PRINTS Ankyrin repeat signature 91 105 IPR002110 GO:0005515
Pste1g00220 248 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
Pste1g00220 248 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Pste1g00220 248 MobiDBLite consensus disorder prediction 165 187 - -
Pste1g00220 248 SMART ANK_2a 8 38 IPR002110 GO:0005515
Pste1g00220 248 SMART ANK_2a 108 137 IPR002110 GO:0005515
Pste1g00220 248 SMART ANK_2a 75 104 IPR002110 GO:0005515
Pste1g00220 248 SMART ANK_2a 42 71 IPR002110 GO:0005515
Pste1g00220 248 Gene3D - 6 182 IPR036770 -
Pste1g00220 248 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Pste1g00220 248 Pfam Ankyrin repeats (3 copies) 80 159 IPR002110 GO:0005515
Pste1g00220 248 Pfam Ankyrin repeats (3 copies) 13 71 IPR002110 GO:0005515
Pste1g00220 248 ProSiteProfiles Ankyrin repeat region circular profile. 42 69 - -
Pste1g00220 248 SUPERFAMILY Ankyrin repeat 13 151 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00220 11 152 Miscellaneous Gene Families AT1G05640 35.862 8.21e-14 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00220 1 777336 778906 Pste1g00220 1 777336 778906 ECH