Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00166 GGTACTGATTCAATCACACAGCCAGGATTTTCCCTGTGCACAGCACCACTACCCCATCGGTGCTCCACCGTTTCCACTTCAAGGCAAATTCATCATTTCTCTCTCTTCCACCGAGAACCCCTTCCTCCTCTCTCTCGCTCTAATTTGAAGAAGAATCCGAATCACGCATCTCGTTCTGTTATTATCTTTCAAACTGTCGTGTTGACCTGTTGTTCTCTCTTCTCTGTTCCCTGTTCTGCTTCGAGTCATGGCAATGTGATTAGGGTTAGGGTTAGGTTTACGTTTAGGGTTTCGGTTATCGACATGTCCGATCCTTCCAGGGGTCGTGTTACCATTACTCTAGGGCGTAGCGGCCAGGTTGTGAAGAGGGATGTATCTGCTGTAGATGTTTCTTCTTTCTCTTCTATTCCCTCAGTCGGCACTAAGCGGTCTGTAAGAGACAGGATTGGAAATAATGCAGATAGTTCTGTGTGGCATGGAAATGGACTTGGCGGCAATAAACGACATCGAGGAGATGTAAGCATGCAAAATGGACTGGATGACAATGATCTTCGATTGAAGCTCATGCAAAAAAGTGCATCTAGGCAGGCTGACAGCAATGGTAGTAAGAGGCATATCGACCTCCGTGAAAAACTTTCAAAGGCAACTCACCCTCTGCCAAACAGTTTTAATTCAAAGCAGCATGTGCCAGAATCAAGGGAAACCAGTTTGTTGAGGCAAATTCCCTCAGCCAGAAGTTCTGATGATTTACTGCGTATGGAGTCCATGAGAAGCTCATACTCTCCTTGGACACTAGATCATATTAGGAGAAGATCACCAGATCGGTTTCCAACTACATCCCGAGGGATTTCCCCCCAAAGAGATGTTCAAGACATACAGAGAAGGCCTTTAAACAGGACATATGATGGTGTCAGATCAGTTACATATGTAGGTAGGGATGTTCTTGAAACATCGAGGCCTCCAGTAAGTACTCCTCAATCTTTCATGTCACGATCCACAATGTCCACATTACCTCCAGTAACTGCTAAGCCTGTAGCATCACATCCTGGTCAACTTCCTCCATCTAGTAGTGTTGCACAAAGGTCTTCATATGTGGGTGATGAACAAGTACCACAGTCGCACCAAACTGTGGATGGCCTGTTACATGCGTTGGGACTTCAAAAATATGCCATTCTCTTTAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGACCTCAAAGAGCTTGGGATTCCTATGGGTCCGAGGAAAAAAATTCTTCTCGCTCTCTTGCCTCGTACCAAGCGTCAACTACATTGATTGATATCTATGCTGCATGATGCTGAAACTGGCACATTATTGGATCACTAGTTTACCTTCAATTTTTATTTTTTATAATTTGGATAATGGTAAAACACACATCTGAGAATTTTTACGAGTATAACATCCCTTGTCCCTTGTAGGGTTCGAGTATCATTTGTATCCAGTCTCGCATTTTTGCATTCAAGAACAGGTTCGGGCTAAAATTGTCGTTTATTGGCAATACTGATCTGTAATATATGATGTCCAAACTTTATCTTAGTTTTTTGATGAAGAGGAATAGGAAGTTGAATCAATTTATCCCGAGTCAAGGACTATAGATATGAAACATTGT 1648 0.4308 GTDSITQPGFSLCTAPLPHRCSTVSTSRQIHHFSLFHREPLPPLSRSNLKKNPNHASRSVIIFQTVVLTCCSLFSVPCSASSHGNVIRVRVRFTFRVSVIDMSDPSRGRVTITLGRSGQVVKRDVSAVDVSSFSSIPSVGTKRSVRDRIGNNADSSVWHGNGLGGNKRHRGDVSMQNGLDDNDLRLKLMQKSASRQADSNGSKRHIDLREKLSKATHPLPNSFNSKQHVPESRETSLLRQIPSARSSDDLLRMESMRSSYSPWTLDHIRRRSPDRFPTTSRGISPQRDVQDIQRRPLNRTYDGVRSVTYVGRDVLETSRPPVSTPQSFMSRSTMSTLPPVTAKPVASHPGQLPPSSSVAQRSSYVGDEQVPQSHQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKRQLH 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00166 437 ProSiteProfiles SAM domain profile. 372 435 IPR001660 GO:0005515
Pste1g00166 437 MobiDBLite consensus disorder prediction 319 340 - -
Pste1g00166 437 SUPERFAMILY SAM/Pointed domain 373 428 IPR013761 -
Pste1g00166 437 MobiDBLite consensus disorder prediction 317 371 - -
Pste1g00166 437 MobiDBLite consensus disorder prediction 217 243 - -
Pste1g00166 437 Pfam SAM domain (Sterile alpha motif) 373 428 IPR001660 GO:0005515
Pste1g00166 437 MobiDBLite consensus disorder prediction 211 243 - -
Pste1g00166 437 Gene3D - 374 436 IPR013761 -
Pste1g00166 437 MobiDBLite consensus disorder prediction 150 179 - -
Pste1g00166 437 PANTHER SCP160 310 432 - -
Pste1g00166 437 SMART SAM_4 369 434 IPR001660 GO:0005515
Pste1g00166 437 MobiDBLite consensus disorder prediction 350 371 - -
Pste1g00166 437 FunFam DDHD domain-containing 2 375 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00166 Pste-Chr1 633771 646438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00166 333 428 Glycosyltransferase AT3G07170 43.137 1.35e-16 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00166 1 633771 646438 Pste1g00166 1 633771 646438 ECH