Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00116 CAAAACTATATATATGGACCCTCCTTAAACCCTTTTCTAGCACAGCCAATTAAAATAAACTATTTCTGAAAACTTTCTTTCTCATTTTCTTGCCTCACTTTCTTCTCTCTCTCTAGTGTACCTTATCAAACAAGTTATTTTTGGTGTTTACAATGATGATGAGCCGCAGTGGCACCAACCGTGTGGCAAACACTGCACTGCTGGTGGCGAAGGGTTTAAGCGGTGAAGTTGGTGGTTTAAGAGCATTCTATGGCGGTGGTGTGAAGAGTGAAAGCACTCTAACCATGTCAGAGAAGGAGAAGAAGGTTGATTTGTCTCCTACTCATTGTGGGAACAAAGAGGAAAAAGGGTTTGTGAGTTATTGGGGCATTGAACCCTCTAAGATCACCAAAAAGGATGGCACAGAATGGAAGTGGAATTGTTTCAGGCCATGGGAGACTTACAAAGCAGATGTTAGGATTGATCTGAAGAAGCACCATGCACCTGTGACCTTCATGGACAAAATGGCTTTTTGGACAATCAAAGCTCTTAGATACCCCACAGACTTGTTTTTCCAGAAACGATATGGATGTCGAGCAATGATGTTAGAGACAGTGGCAGCAATCCCTGGGATGGTAGGAGGCATGATACTGCACACAAAATCCCTTAGAAGATTTGAGCACAGTGGTGGATGGATCAAAGCGCTGCTAGAAGAAGCAGAGAATGAGCGTATGCACCTAATGACTTTCATGGAAGTGTCAAAGCCCAAGTGGTATGAACGTGCTCTTGTCATAACTGTGCAGGGTGTTTTCTTCAATGCTTATTTTCTGGGGTATTTGTTGTCACCTAAATTTGCCCACCGCATGGTTGGTTACCTTGAAGAAGAGGCCATACACTCCTACACAGAGTTCCTTAAGGAGTTGGACAAGGGCAGTATAGAAAATGTGCCAGCTCCAGCTATTGCCATAGACTATTGGCAGCTCCCACCAGACTCTACTTTAAGGGATGTTGTCATGGTTGTCAGACCTGACGAGGCACACCATCGTGATGTCAACCACTTTGCATCGGACATACACTACCAAGGAAGAGAGTTAAGAGAGGCTGCTGCTCCAATTGGTTATCACTAGACTCCTAATTTTGGCCTCTTCTGATGTTGGAGAGTAAAAAATGAGACAAATTCTGATGTCATTTTGGCTAGAATAAATGAAATAGCTAGTTACCGACTATACAGAGGTTTTGTGGCATGTAAATACTAAATAATGTGTGGTGGAGTCTTTATTTGTTCAAAATCATATCCGGAGTATTTGTACTGTGCATTCTGTAAGGTACAAGTGGAGTTATACGAATATCGTTTTTGCTTCTTCTGGGACTTCCGAGGTTTTGGCAATCAACAAGTAAAAAAAAACAATTGTGACTGATATCTGTATAATTACTATCCTAGAAGTTATAAGCATCATGAAAATTACACCAGTCCGAGGATGTTGTGTATTAATGACTATTCTTTGATGTTGACATAAATAGTACCAATAGATTTTATGATAGAAGCACAATAATTCTTTGGATTTCAGGACATGGAAAAACCTCCAAAATAATATAAAATTGACTTGTAACCTTCTGCCTGTTATGCATTATTCGAATGTCCAGTATATAAACCCAAAACAAG 1642 0.4056 MMMSRSGTNRVANTALLVAKGLSGEVGGLRAFYGGGVKSESTLTMSEKEKKVDLSPTHCGNKEEKGFVSYWGIEPSKITKKDGTEWKWNCFRPWETYKADVRIDLKKHHAPVTFMDKMAFWTIKALRYPTDLFFQKRYGCRAMMLETVAAIPGMVGGMILHTKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSKPKWYERALVITVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGSIENVPAPAIAIDYWQLPPDSTLRDVVMVVRPDEAHHRDVNHFASDIHYQGRELREAAAPIGYH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00116 317 FunFam Ubiquinol oxidase 70 314 - -
Pste1g00116 317 Pfam Alternative oxidase 107 297 IPR002680 GO:0009916
Pste1g00116 317 CDD AOX 134 301 IPR002680 GO:0009916
Pste1g00116 317 Gene3D Alternative oxidase 68 313 IPR038659 -
Pste1g00116 317 PANTHER ALTERNATIVE OXIDASE 41 317 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00116 Pste-Chr1 450760 454722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00116 30 317 Miscellaneous Gene Families AT3G22370 78.146 1.00e-180 501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00116 1 450760 454722 Pste1g00116 1 450760 454722 ECH