Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00087 ACAGATAATTAATGCCATTATGAGTGGAAGAGATGTTCTGGTGATTATGGCTGCAGGTGGTGGCAAGAGCCTCTGCTACCAGCTTCCTGCTGTTCTTCGCGATGGAATTGCTCTAGTTATTAGTCCTTTGCTTTCCTTAATTCAAGATCAGGGGAGATTGCTTCAGGTAATGGGTTTGACTGCTTTGGGCATTCCAGCATATATGTTGACTTCCACAAATAAAGGAGATGAGAAGTTTATATACAAGGCTTTGGAGAAGGGAGAGGAGGAACTCAAAATATTATATGTCACTCCAGAAAAGATATCAAAAAGCAAGAGGTTTATGTCAAAACTTGAAAAATGCCATCATGCTGGTCGTCTCTCTCTAATTTCAATTGATGAAGCACATTGCTGTAGTCAGTGGGGTCATGACTTTCGACCTGACTACAAGAGCCTTGGTATTCTCAAGACACAGTTCCCTAATGTTCCCATGGTTGCTTTGACTGCAACTGCTACTCAGAGGGTCCAAAATGATCTGATAGAGATGTTGCATATTCCTAGAAGTGTCAAATTTGTCAGCACAGTCAATAGGCCCAACTTGTTTTATATGGTAAAGGAAAAGTCATCTGTTGGGAAGGTAGTTATTGATGAAATTGCAGAATTCATTCAAGAATCTTATCCAAATAATCAATCAGGAATTGTTTATTGCTTCTCTAGGAAGGAATGTGAACAGGTTGCAAAGGAGTTGAGGGAGAGAGGGATTTCAGCTGATTATTATCATGCAGATATGGATGTAAATGCTCGGGAGAAAGTTCACATGCGGTGGAGCAATAATAGGCTGCAGGTCATAGTTGGTACAGTAGCTTTTGGTATGGGGATCAACAAACCAGATGTGGATGTTCATGTTGTATTTGCTTCACCTTCACTGAAGCTGATAACATTTAATGCTAGATATTTTCATGTAGTCAGGAAAGTGGTCGAGCTGGTCGAGATGGACTTCCTTCTGAATGCCTTCTATACTTCAGACCTGGTGATGTTCCCCGTCAGTCCAAAAGACAATGCCGACGAAGTGCCTTTTTTCGGCATTTTGCTGAGCCACTTCAAGAGTGCAATGGTACCTTTTGATCCTGTCATTTACTTCTCTTTCATTCTTTGCCCTGCTGTTTCAGGCTTTATATACTCTCTGAGTCTTGATGTAACAGGGATGTGCGATATTTGTGCATTCTCAAGTGAGGTGAAGGAAATGGATGTCTCTGGTCATGCAAAACTGATGGTTTCATTCTTGCAAGATATGCAAACAAATGATCAAAGGTCGACTATGTTGCAATTAGTTGATAAAATGAAAGTAAAACAGAAGGAACTAGGTTCTGAATTGAAACGAGAGGAAATTGAGCAGCTCATCTTACACCTTTTAATGCAGCGGTTTTTGAAAGAAGAATTTCAGCATACAGCTTATGCCACAAATGCTTACATTGCTGTGGGGCCGTTGGCCAAGCAAATATTGCAAGGGAAGAAATCCGTGAAACTTGAGATTTACGCTGAACAGAGAACTAAAACTGGTATAAGATCAGTAAAACGCTGCCTCGGGTCCTCTGGTTTGGAGCTAAAGCTTGATGAGCTGAGAAAAGAACTTTCCTGTGCACATGGAGGAATATTCCCACACTCCTTGGAGAAGGTGATTGGAAAATTGAAGACAGAAAAGTATGGAAATAGAATACTCGAGCAAATTGAAAAATATTCTGATTTCAAGACGACTGATAAGCAGGAAACTGTTGGTAGGGATGCAAAGAGGTCTAAGACTAAGAAAAATCTTGTTCTTATTGAGAGTAGTGAAGATGAAGAGTAATATCCAGTGGAGTCTTACACTGCAAGCAATTGATGTTTTATTCAATAATATGGCACGATTGTGAAAAATGCAGTATATTCATTCTTACAAATCGAGCTTCTGGTTCATCCAAAGGAGGAAAATGGGATCTGGATGACAAATGACAGATGGCCGTAAGACTTACTTAATTTAAAGTTTGAATTAACGGATACATATTAAACTAAACATACACTTATTTTTCTTATCTATAAAAACAGTTGGTAAGATCAAAAGTAAATTAGAGACATTAC 2094 0.393 MSGRDVLVIMAAGGGKSLCYQLPAVLRDGIALVISPLLSLIQDQGRLLQVMGLTALGIPAYMLTSTNKGDEKFIYKALEKGEEELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLGILKTQFPNVPMVALTATATQRVQNDLIEMLHIPRSVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNNQSGIVYCFSRKECEQVAKELRERGISADYYHADMDVNAREKVHMRWSNNRLQVIVGTVAFGMGINKPDVDVHVVFASPSLKLITFNARYFHVVRKVVELVEMDFLLNAFYTSDLVMFPVSPKDNADEVPFFGILLSHFKSAMVPFDPVIYFSFILCPAVSGFIYSLSLDVTGMCDICAFSSEVKEMDVSGHAKLMVSFLQDMQTNDQRSTMLQLVDKMKVKQKELGSELKREEIEQLILHLLMQRFLKEEFQHTAYATNAYIAVGPLAKQILQGKKSVKLEIYAEQRTKTGIRSVKRCLGSSGLELKLDELRKELSCAHGGIFPHSLEKVIGKLKTEKYGNRILEQIEKYSDFKTTDKQETVGRDAKRSKTKKNLVLIESSEDEE 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00087 601 SMART RQC_2 403 500 IPR018982 GO:0006260|GO:0006281|GO:0043138
Pste1g00087 601 NCBIfam RecQ family ATP-dependent DNA helicase 1 290 IPR004589 GO:0004386|GO:0006310
Pste1g00087 601 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 176 IPR014001 -
Pste1g00087 601 FunFam ATP-dependent DNA helicase 399 499 - -
Pste1g00087 601 Coils Coil 431 451 - -
Pste1g00087 601 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 201 372 IPR001650 -
Pste1g00087 601 SMART ultradead3 1 192 IPR014001 -
Pste1g00087 601 Gene3D - 399 499 IPR036388 -
Pste1g00087 601 PANTHER DNA HELICASE RECQ FAMILY MEMBER 1 293 - -
Pste1g00087 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 294 IPR027417 -
Pste1g00087 601 Pfam DEAD/DEAH box helicase 2 163 IPR011545 GO:0003676|GO:0005524
Pste1g00087 601 SMART helicmild6 230 312 IPR001650 -
Pste1g00087 601 FunFam ATP-dependent DNA helicase RecQ 1 183 - -
Pste1g00087 601 Pfam RQC domain 400 504 IPR018982 GO:0006260|GO:0006281|GO:0043138
Pste1g00087 601 Gene3D - 184 305 IPR027417 -
Pste1g00087 601 Pfam Helicase conserved C-terminal domain 205 294 IPR001650 -
Pste1g00087 601 Gene3D - 1 183 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00087 Pste-Chr1 363330 382634 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00087 1 363330 382634 Pste1g00087 1 363330 382634 ECH