Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00064 GAAAAAGAAAAAGAGGAAGTGAGTAGCAGTGAGTGGGTGGCTGAGAAGGGGAATAAAAACAAGAAAGAAGGTTGGCGAGGAATTGTTTGATCGGGACTAGGGTTTGATTCGCAGCAAGCATCAATGAAACCAGGTTTCATCTGATTCCTCTTCTCCAACGCTTGCTTCTTGTTCATCTTCTTCCAATCCTCTACGCTCGCCAATTATGATTATTATCATGAACTCCATCTTCGCCGCTCATAACCTTCGTGTCTTCGGTCCCGGCTTGAATCCCTTCGCACCCTATTGCCTTTCCAATCACTCTCTTCCCTCTCGCTAAATCATTCCCCTTCGCCTTCTCTTTTTCGGGCTTCCACTTTCCCCTCCTTTCCTTTTCTTTTATCTGTCTCCGTTTTCCCTCACAAACAAACCCACCAACATGCTCGAGGAACGCCCTCTTTTCTTCCGGAAGAGCCCTTCCCGGAGGCGCCTCAGACCTGCCTTTGATACCGATGATCGCGGCTGGACCTCCCTTCATGTTTTCGCCCGAAAAGGCGATCTTAAACTGGTTTCCACTCACTTTGTTGGTTCGTCGAATTTGAATTTAAATCCATCATACTTTTGTGTGAGGGAATTATGTTTCCTTTCAAGATTGGAGTTCCTTGTTTCCCCCCATCTTTCAATACGAAGATTCTCTGCTGCGGAGAATAAGGTTAAAAAACTTCTCAATGAAGGGATGGATGTCAATGTGTCTGCATGGGGCCCTAAATCAAAAGGGGTGACCCCTCTCCACCTTGCTGCCGAAGGTGGTCACATTGGAGTGATGGATGTACTACTTGAGCGTGGTGCTGACATTGATGCCAGAACTAAGGGTGCTTGTGGCTGGACACCGCTCCACATTGCAGCCAAAGAAAGGAGGAGGGATGCTGTGAAATTCTTGATAGAGAATGGAGCCTTCTTGCCACCTGATATCCATGATAGCAGATTTAACCCTCCGCTTCATTACTGCCCTGGACTAGAATGGGCATATGAGGAGATGAAGCGATTGCGACGGGAAGACCTATCTGCTGGAGAGACATCTTACAGCTCTGAAAGTTAATCTACCTTTTAGACATTTGGTTGGTGTTTGGTAGTGCGTTTGAACACCTGTTAGAGGAGAACCATGTGTGTCGGTCTGTCAGGATGAAGCAAATATAACCGTTGCTTTTATGAACTTGACATGAAATGAGTTAATACTTGCGTTCAGGAAGCTAATCCGGACATGTATTAAATCTTCATTTTGGTAATGAATGTAGAATTGAAATAAATAAACTAGGCACGAATTGCTTAATGTATGGGGATATGTTACTATTTTAGCATGTTGAATGTTCTTTGTTTATATGGAAACAATTATGTACTGCTGTTAATGTGATATGTTATGTTTTTTTATGTTGTCATTTACGAATTGTGTAGCTGCACAAAATGTTTTGGA 1450 0.4372 MLEERPLFFRKSPSRRRLRPAFDTDDRGWTSLHVFARKGDLKLVSTHFVGSSNLNLNPSYFCVRELCFLSRLEFLVSPHLSIRRFSAAENKVKKLLNEGMDVNVSAWGPKSKGVTPLHLAAEGGHIGVMDVLLERGADIDARTKGACGWTPLHIAAKERRRDAVKFLIENGAFLPPDIHDSRFNPPLHYCPGLEWAYEEMKRLRREDLSAGETSYSSES 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00064 219 Gene3D - 18 207 IPR036770 -
Pste1g00064 219 PRINTS Ankyrin repeat signature 128 142 IPR002110 GO:0005515
Pste1g00064 219 PRINTS Ankyrin repeat signature 28 43 IPR002110 GO:0005515
Pste1g00064 219 SMART ANK_2a 112 141 IPR002110 GO:0005515
Pste1g00064 219 SMART ANK_2a 147 180 IPR002110 GO:0005515
Pste1g00064 219 SMART ANK_2a 27 56 IPR002110 GO:0005515
Pste1g00064 219 ProSiteProfiles Ankyrin repeat region circular profile. 147 172 - -
Pste1g00064 219 Pfam Ankyrin repeats (3 copies) 87 172 IPR002110 GO:0005515
Pste1g00064 219 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED 90 172 - -
Pste1g00064 219 ProSiteProfiles Ankyrin repeat profile. 147 172 IPR002110 GO:0005515
Pste1g00064 219 ProSiteProfiles Ankyrin repeat region circular profile. 112 144 - -
Pste1g00064 219 ProSiteProfiles Ankyrin repeat profile. 112 144 IPR002110 GO:0005515
Pste1g00064 219 SUPERFAMILY Ankyrin repeat 24 190 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00064 84 202 Acyl Lipid Metabolism Gene Families AT5G53470 33.613 6.10e-09 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00064 1 296679 300738 Pste1g00064 1 296679 300738 ECH