Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g6076 ATGAGTGGTGCCCTAGCTGGTGCTATGACTAAAGCTATTCTTGCTCCTCTTGAAACTATCAGGACAAGAATGGTAGTTGGTATTGGGTCGAAAAATATCACAGGTAGTTTCGTTCAGGTTGTAGAGCAGCAGGGATGGCAAGGATTGTGGGCTGGTAACATGATCAATATGATTCGTATAGTTCCAACGCAGGCCATTGAGTTTGGCACATTTGAGTGTACAAAGCGGGCGATGGCATCGTTGCAAGAGAAATTGAAACAGAATGAATGTCCCAAGTTGCAGATAGGTTGCCTCAATTTGAGCTTGAACTTATCTTGGATTTCACCAACTGCTGTGGCTGGGGCAGCTGCTGGAGTTGCTAGCACACTTGTATGCCATCCCCTGGAAGTTTTGAAGGATCGGTTAACTATAAGTCCTGAAATATACCCTAATTTGGGCACTGCAATTAGAAATATTTATAAAGATGGTGGTATTGGCGCTTTTTATGCTGGTTTATCACCTACTCTAGTTGGCATGCTTCCATACAGTACCTGTTATTATTTCATGTATGACACAATAAAGAAATCTTACTGCCTGACCAAAAATAAGAAGTCTTTAAATCGTCTGGAGATGCTTATGATTGGAGCTCTATCAGGTTTTACTGCCAGTACAATTAGCTTTCCCTTGGAGGTAGCAAGAAAGCGTCTGATGGTAGGAGCATTGCAAGGGAAGTGCCCACCAAACATGGCAGCGGCATTGTCCGAAGTCATTAGAGAAGAAGGTCTGAAGGGTCTGTACAGAGGGTGGGGTGCAAGCTGTTTAAAGGTAATGCCATCCTCAGGAATCACCTGGATGTTTTATGAAGCATGGAAAGACATACTGCTTGTCCAGAAGGGTATTTCCTTATAA 888 0.4324 MSGALAGAMTKAILAPLETIRTRMVVGIGSKNITGSFVQVVEQQGWQGLWAGNMINMIRIVPTQAIEFGTFECTKRAMASLQEKLKQNECPKLQIGCLNLSLNLSWISPTAVAGAAAGVASTLVCHPLEVLKDRLTISPEIYPNLGTAIRNIYKDGGIGAFYAGLSPTLVGMLPYSTCYYFMYDTIKKSYCLTKNKKSLNRLEMLMIGALSGFTASTISFPLEVARKRLMVGALQGKCPPNMAAALSEVIREEGLKGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVQKGISL* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g6076 295 Gene3D Mitochondrial carrier domain 1 291 IPR023395 -
Psa7g6076 295 Pfam Mitochondrial carrier protein 1 78 IPR018108 -
Psa7g6076 295 Pfam Mitochondrial carrier protein 202 288 IPR018108 -
Psa7g6076 295 Pfam Mitochondrial carrier protein 109 190 IPR018108 -
Psa7g6076 295 PANTHER MITOCHONDRIAL ADENINE NUCLEOTIDE TRANSPORTER BTL1-RELATED 1 292 - -
Psa7g6076 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 199 286 IPR018108 -
Psa7g6076 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 189 IPR018108 -
Psa7g6076 295 PANTHER SOLUTE CARRIER FAMILY 25 1 292 - -
Psa7g6076 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 77 IPR018108 -
Psa7g6076 295 PRINTS Mitochondrial carrier protein signature 12 26 IPR002067 GO:0055085
Psa7g6076 295 PRINTS Mitochondrial carrier protein signature 52 72 IPR002067 GO:0055085
Psa7g6076 295 PRINTS Mitochondrial carrier protein signature 162 180 IPR002067 GO:0055085
Psa7g6076 295 PRINTS Mitochondrial carrier protein signature 208 230 IPR002067 GO:0055085
Psa7g6076 295 SUPERFAMILY Mitochondrial carrier 2 281 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g6076 Psa-Chr7 491190494 491196358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g6076 1 288 Organic Solute Cotransporters AT3G20240 75.694 2.10e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g6076 - - gmx:100777341 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g6076 7 491190494 491196358 Psa7g6076 7 491190494 491196358 ECH