Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g6074 ATGTCAATGATGTCGACGACTTCAACCATTAATCATGCAATGTCAATCAGAAGAAGCAACAACAACAACAATGCTTTCTCTCCGTTTCGAATGATTAATTGCTCCAATTCAAATCCAAATAACCGTTCTGTTGCTGGCGGTGGCTTCGGAGATAAGACCAACAAACCTAACAAAAAGGGTTCGCAATCGCGGCGAAACCCAAGGGAATCATCAACTAAACAATCTCAGGCACCGCGTTTAACTTCAAAAGTTGATGGCAAATCCAGAAGCATTTCTTCGGACATTGATTTTGAAGAACGCCTAAAAGCAGTTAGAAGGTCAGCACTAGAGAAAAAGAAGGCAGAAGAGAAAAAAGAATTTGGAGCTATTGATTATGACACACCTATTTCTTCAGACAACAAGACAATTGGTTTTGGTACCAAGGTTGGAATAGGTGTAGCTGTTGCTGTCTTTGGTCTGGTTTTTGCTTTAGGAGATTTTCTTCCATCTGGAAGTCCCAACGAAGACACTGCTGTGGTCAATGATAAGTTGTCAGAGAAGGATAAAGCTGCTCTTCAGAGTAGGCTTAAGGAATTTGAAGCGACATTAAGTAACTCCCCAAGAGATCCAGCAGCTATCGAAGGTGCTGCAGTAACATTGGCAGAACTAGGGGAATATTCAAAAGCTGCTTCTCTACTCGATGATTTGACGAAGGAAAAACCAAATGATGCTGATGCTTTTCGTTTGCTTGGAGAAGTTAAGTATGAACTTAAAGATTATGATGGGAGTGTTGCTGCATATAAAAGTTCGGCAAAGGTATCTGAAGATGTCAATTTTGAAGTTCTGCGTGGCCTTACCAATTCATTACTTGCTGCTAAGAAGCCAGATGAGGCTGTTCAATTACTTTTGGCTTGTCGCGACCGCCTGAGCTCAAAAGACTTGAGCAACAAAGCTGATAGCAGCCCAACAGACTCACAGAAGCTGGATCCAGTTCAAGTTGAATTACTTCTAGGGAAAGCCTATTCAGACTGGGGCCATGTTGGTGATGCTATAGCTGTTTACAATCAACTCATATCTACTCATCCTGATGACTTCCGTGGATACTTAGCTAAGGGAATCATCTTAAAAGAAAGCAAAAACATTGGAGATGCAGAGAGGATGTTCATACAAGCTAGGTTCTTTGCACCAGATAAAGCTAAAGCACTTGTGGACCGTTATTCAAGATAA 1206 0.4138 MSMMSTTSTINHAMSIRRSNNNNNAFSPFRMINCSNSNPNNRSVAGGGFGDKTNKPNKKGSQSRRNPRESSTKQSQAPRLTSKVDGKSRSISSDIDFEERLKAVRRSALEKKKAEEKKEFGAIDYDTPISSDNKTIGFGTKVGIGVAVAVFGLVFALGDFLPSGSPNEDTAVVNDKLSEKDKAALQSRLKEFEATLSNSPRDPAAIEGAAVTLAELGEYSKAASLLDDLTKEKPNDADAFRLLGEVKYELKDYDGSVAAYKSSAKVSEDVNFEVLRGLTNSLLAAKKPDEAVQLLLACRDRLSSKDLSNKADSSPTDSQKLDPVQVELLLGKAYSDWGHVGDAIAVYNQLISTHPDDFRGYLAKGIILKESKNIGDAERMFIQARFFAPDKAKALVDRYSR* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g6074 401 SUPERFAMILY TPR-like 190 370 IPR011990 GO:0005515
Psa7g6074 401 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 19 401 - -
Psa7g6074 401 MobiDBLite consensus disorder prediction 46 91 - -
Psa7g6074 401 MobiDBLite consensus disorder prediction 67 88 - -
Psa7g6074 401 Pfam Tetratricopeptide repeat 189 244 - -
Psa7g6074 401 Gene3D Tetratricopeptide repeat domain 170 399 IPR011990 GO:0005515
Psa7g6074 401 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 19 401 - -
Psa7g6074 401 SMART tpr_5 203 236 IPR019734 GO:0005515
Psa7g6074 401 SMART tpr_5 358 391 IPR019734 GO:0005515
Psa7g6074 401 SMART tpr_5 324 357 IPR019734 GO:0005515
Psa7g6074 401 SMART tpr_5 237 270 IPR019734 GO:0005515
Psa7g6074 401 ProSiteProfiles TPR repeat profile. 324 357 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g6074 - - gmx:100777868 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g6074 7 491151295 491156867 Psa7g6074 7 491151295 491156867 ECH