Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g6072 ATGGCGGATTCCGGAGAAGGGCCTGATGGGGTGAGAGACAATTATGCGTTAGCGAGCAAGAAAATTGAGATTCGTCAACACGGTGGTGTACACATATACTTCTCTGGGGAAAAACTTGGCTTTCGATACTTGGTGTATTTGAGTTGGTGGGAAATAATCAGATCCCCTGAATTTTGGTTGCGAGAAGAACTTCATAATCAACCCTATGAAAAAATTAATTGGACGAAAGCACGTCACCTATGTGCAAAAGAAGATATTTACTATCCGCATCCTTTGATACAAGATATCATATGGGATAGCTTGTATATTTTCACCGAGCCACTTTTAAATCGTTGGCCTTTCAACAAATTGGTTAGGAAAAGAGCCCTTGAAGTAACAATGAAGCATATTCACTACGAGGATGAGAATAGTCGATACCTTACTATTGGTTGTGTGGAAAAGGTTTTATGTATGCTTGCTTGTTGGGTGGAAGATCCAAACGGAGATGCTTTCAAGAAGCATCTAGCAAGGGTCCCTGATTACTTATGGGTTTCAGAAGATGGAATGACCATGCAGAGTTTTGGTAGTCAAGAATGGGATGCTGGTTTTGCCGTTCAAGCATTGCTTGCCACTAACCTAATTGAGGAAATCAAACCTACACTTACAAAAGGACACGATTTCATCAAAAAGTCTCAGGTTACAGAGAATCCTTCTGGAGATTTTAAGAGTATGCATCGTCATATTTCTAAAGGCTCGTGGACCTTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGTACCGCAGAAGGTTTAAAGTGTTGTCTACTTTTATCATTGTTGCCTCCAGAAATTGTGGGGGACAAGATGGAACCTGAAAGGCTATTTGATTCTGTCAATCTCCTAATGTCTCTTCAGAGTAAAAAAGGAGGTTTGGCAGCCTGGGAGCCCGCTGGAGCTCAAGAATGGTTAGAACTACTCAATCCCATTGAATTTTTAGCGGACATTGTAGTTGAACATGAACATGTTGAATGCACTGGAACTGCAATTCAAGCTTTAGTTTTGTTCAAGAAGCTACATCCAAGGCATAGGAAGAACGAAATAGAAAATTTCATTTTCAATGCAGTTCGATTCCTTGAAGATGCGCAAGCATGTGATGGTTCATGGTATGGAAACTGGGGAATTTGCTTTACTTATGGATCTTGGTTCGCTCTTGGTGGTTTAGCAGCTGCTGGAAAGACTTATACCAATAGTGAGACTATTCGAAAAGGTGTTAAATTTCTTCTCGCAATGCAGGGAAAAGATGGTGGATGGGGGGAGAGCTATCTTTCATGCCCAAAAAAGATATATGTTCCTCTGGAAGGAAGCCGGTCAAATGTTGTACACACTGCATGGGCCCTTATGGGTTTAATTCATGGCGGCCAGGCAAAAAGAGACCCTACTCCTCTTCACAATGCTGCAAAATTGCTCATTAATTCCCAGTTAGAAGATGGTGATTGGCCCCAACAGGAAATCACAGGAGTAGTCTTGAGAAATTGTATGCTGCATTACCCAATGTATAGAAATATTTACCCATTATGGGCTCTAGCTGAATATTCTAGACATGTTCCATTGCCTTCCATTGCGTTTTAA 1611 0.4122 MADSGEGPDGVRDNYALASKKIEIRQHGGVHIYFSGEKLGFRYLVYLSWWEIIRSPEFWLREELHNQPYEKINWTKARHLCAKEDIYYPHPLIQDIIWDSLYIFTEPLLNRWPFNKLVRKRALEVTMKHIHYEDENSRYLTIGCVEKVLCMLACWVEDPNGDAFKKHLARVPDYLWVSEDGMTMQSFGSQEWDAGFAVQALLATNLIEEIKPTLTKGHDFIKKSQVTENPSGDFKSMHRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSLLPPEIVGDKMEPERLFDSVNLLMSLQSKKGGLAAWEPAGAQEWLELLNPIEFLADIVVEHEHVECTGTAIQALVLFKKLHPRHRKNEIENFIFNAVRFLEDAQACDGSWYGNWGICFTYGSWFALGGLAAAGKTYTNSETIRKGVKFLLAMQGKDGGWGESYLSCPKKIYVPLEGSRSNVVHTAWALMGLIHGGQAKRDPTPLHNAAKLLINSQLEDGDWPQQEITGVVLRNCMLHYPMYRNIYPLWALAEYSRHVPLPSIAF* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g6072 536 Gene3D - 162 535 - -
Psa7g6072 536 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 125 529 IPR008930 -
Psa7g6072 536 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 58 526 IPR018333 GO:0005811|GO:0016104|GO:0016866
Psa7g6072 536 Pfam Squalene-hopene cyclase C-terminal domain 192 526 IPR032696 -
Psa7g6072 536 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 58 530 IPR018333 GO:0005811|GO:0016104|GO:0016866
Psa7g6072 536 PANTHER LUPEOL SYNTHASE 1 58 530 - -
Psa7g6072 536 ProSitePatterns Terpene synthases signature. 379 393 IPR002365 GO:0016866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g6072 Psa-Chr7 491129255 491132207 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g6072 K15813 - gmx:547702 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g6072 7 491129255 491132207 Psa7g6072 7 491129255 491132207 ECH